RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 SPRR2AP35326 72 aa4.01□□□□□ -1.77
CNOT1-207ENST00000565605 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
CNOT1-207ENST00000565605 PSPHP1O15172 72 aa3.98□□□□□ -1.77
CNOT1-207ENST00000565605 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
CNOT1-207ENST00000565605 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
CNOT1-207ENST00000565605 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
CNOT1-207ENST00000565605 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
CNOT1-207ENST00000565605 A0A1B0GU33 70 aa3.91□□□□□ -1.78
CNOT1-207ENST00000565605 A0A1B0GU69 56 aa3.9□□□□□ -1.79
CNOT1-207ENST00000565605 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
CNOT1-207ENST00000565605 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
CNOT1-207ENST00000565605 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
CNOT1-207ENST00000565605 KRTAP8-1Q8IUC2 63 aa3.88□□□□□ -1.79
CNOT1-207ENST00000565605 A0A0D9SG42 100 aa3.87□□□□□ -1.79
CNOT1-207ENST00000565605 SPRR2DP22532 72 aa3.87□□□□□ -1.79
CNOT1-207ENST00000565605 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CNOT1-207ENST00000565605 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
CNOT1-207ENST00000565605 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
CNOT1-207ENST00000565605 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
CNOT1-207ENST00000565605 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
CNOT1-207ENST00000565605 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
CNOT1-207ENST00000565605 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
CNOT1-207ENST00000565605 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
CNOT1-207ENST00000565605 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
CNOT1-207ENST00000565605 A6NED7 52 aa3.75□□□□□ -1.81
CNOT1-207ENST00000565605 A8MU10 97 aa3.75□□□□□ -1.81
CNOT1-207ENST00000565605 UQCR11O14957 56 aa3.68□□□□□ -1.82
CNOT1-207ENST00000565605 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
CNOT1-207ENST00000565605 K7ERS5 55 aa3.65□□□□□ -1.83
CNOT1-207ENST00000565605 ROMO1P60602 79 aa3.64□□□□□ -1.83
CNOT1-207ENST00000565605 MT3P25713 68 aa3.63□□□□□ -1.83
CNOT1-207ENST00000565605 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
CNOT1-207ENST00000565605 TNP1P09430 55 aa3.6□□□□□ -1.83
CNOT1-207ENST00000565605 C10orf95Q9H7T3 257 aa3.6□□□□□ -1.83
CNOT1-207ENST00000565605 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
CNOT1-207ENST00000565605 MT1EP04732 61 aa3.57□□□□□ -1.84
CNOT1-207ENST00000565605 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
CNOT1-207ENST00000565605 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
CNOT1-207ENST00000565605 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
CNOT1-207ENST00000565605 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
CNOT1-207ENST00000565605 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
CNOT1-207ENST00000565605 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
CNOT1-207ENST00000565605 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
CNOT1-207ENST00000565605 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
CNOT1-207ENST00000565605 MT1GP13640 62 aa3.45□□□□□ -1.86
CNOT1-207ENST00000565605 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
CNOT1-207ENST00000565605 MT4P47944 62 aa3.44□□□□□ -1.86
CNOT1-207ENST00000565605 MT1LQ93083 61 aa3.43□□□□□ -1.86
CNOT1-207ENST00000565605 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
CNOT1-207ENST00000565605 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
CNOT1-207ENST00000565605 MT1MQ8N339 61 aa3.39□□□□□ -1.87
CNOT1-207ENST00000565605 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
CNOT1-207ENST00000565605 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
CNOT1-207ENST00000565605 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
CNOT1-207ENST00000565605 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CNOT1-207ENST00000565605 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
CNOT1-207ENST00000565605 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
CNOT1-207ENST00000565605 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
CNOT1-207ENST00000565605 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
CNOT1-207ENST00000565605 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
CNOT1-207ENST00000565605 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
CNOT1-207ENST00000565605 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CNOT1-207ENST00000565605 INE1O15225 51 aa2.97□□□□□ -1.93
CNOT1-207ENST00000565605 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
CNOT1-207ENST00000565605 MT1AP04731 61 aa2.93□□□□□ -1.94
CNOT1-207ENST00000565605 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
CNOT1-207ENST00000565605 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CNOT1-207ENST00000565605 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
CNOT1-207ENST00000565605 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
CNOT1-207ENST00000565605 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CNOT1-207ENST00000565605 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
CNOT1-207ENST00000565605 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
CNOT1-207ENST00000565605 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
CNOT1-207ENST00000565605 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
CNOT1-207ENST00000565605 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CNOT1-207ENST00000565605 PRM1P04553 51 aa1.69□□□□□ -2.14
CNOT1-207ENST00000565605 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
CNOT1-207ENST00000565605 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 129.5 ms