RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 MT1GP13640 62 aa5.57□□□□□ -1.52
COMMD4-212ENST00000565517 K7ERS5 55 aa5.54□□□□□ -1.52
COMMD4-212ENST00000565517 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
COMMD4-212ENST00000565517 MT1LQ93083 61 aa5.51□□□□□ -1.53
COMMD4-212ENST00000565517 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
COMMD4-212ENST00000565517 A6NED7 52 aa5.46□□□□□ -1.54
COMMD4-212ENST00000565517 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
COMMD4-212ENST00000565517 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
COMMD4-212ENST00000565517 MT1MQ8N339 61 aa5.44□□□□□ -1.54
COMMD4-212ENST00000565517 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
COMMD4-212ENST00000565517 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
COMMD4-212ENST00000565517 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
COMMD4-212ENST00000565517 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
COMMD4-212ENST00000565517 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
COMMD4-212ENST00000565517 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
COMMD4-212ENST00000565517 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
COMMD4-212ENST00000565517 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
COMMD4-212ENST00000565517 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
COMMD4-212ENST00000565517 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
COMMD4-212ENST00000565517 ROMO1P60602 79 aa5.17□□□□□ -1.58
COMMD4-212ENST00000565517 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
COMMD4-212ENST00000565517 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
COMMD4-212ENST00000565517 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
COMMD4-212ENST00000565517 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
COMMD4-212ENST00000565517 MT4P47944 62 aa5.08□□□□□ -1.6
COMMD4-212ENST00000565517 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
COMMD4-212ENST00000565517 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
COMMD4-212ENST00000565517 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
COMMD4-212ENST00000565517 GPR98Q8WXG9 6306 aa4.96□□□□□ -1.61
COMMD4-212ENST00000565517 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.62
COMMD4-212ENST00000565517 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
COMMD4-212ENST00000565517 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
COMMD4-212ENST00000565517 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
COMMD4-212ENST00000565517 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
COMMD4-212ENST00000565517 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
COMMD4-212ENST00000565517 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
COMMD4-212ENST00000565517 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
COMMD4-212ENST00000565517 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
COMMD4-212ENST00000565517 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
COMMD4-212ENST00000565517 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
COMMD4-212ENST00000565517 MT1AP04731 61 aa4.69□□□□□ -1.66
COMMD4-212ENST00000565517 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
COMMD4-212ENST00000565517 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
COMMD4-212ENST00000565517 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
COMMD4-212ENST00000565517 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
COMMD4-212ENST00000565517 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
COMMD4-212ENST00000565517 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
COMMD4-212ENST00000565517 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
COMMD4-212ENST00000565517 MT3P25713 68 aa4.29□□□□□ -1.72
COMMD4-212ENST00000565517 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
COMMD4-212ENST00000565517 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
COMMD4-212ENST00000565517 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
COMMD4-212ENST00000565517 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
COMMD4-212ENST00000565517 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
COMMD4-212ENST00000565517 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
COMMD4-212ENST00000565517 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
COMMD4-212ENST00000565517 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
COMMD4-212ENST00000565517 H3BS24 57 aa3.8□□□□□ -1.8
COMMD4-212ENST00000565517 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
COMMD4-212ENST00000565517 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
COMMD4-212ENST00000565517 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
COMMD4-212ENST00000565517 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
COMMD4-212ENST00000565517 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
COMMD4-212ENST00000565517 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
COMMD4-212ENST00000565517 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
COMMD4-212ENST00000565517 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
COMMD4-212ENST00000565517 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
COMMD4-212ENST00000565517 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
COMMD4-212ENST00000565517 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
COMMD4-212ENST00000565517 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
COMMD4-212ENST00000565517 INE1O15225 51 aa3.09□□□□□ -1.91
COMMD4-212ENST00000565517 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
COMMD4-212ENST00000565517 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
COMMD4-212ENST00000565517 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
COMMD4-212ENST00000565517 PRM1P04553 51 aa2.63□□□□□ -1.99
COMMD4-212ENST00000565517 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
COMMD4-212ENST00000565517 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
COMMD4-212ENST00000565517 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 108.2 ms