RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
NSMCE1-209ENST00000565384 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
NSMCE1-209ENST00000565384 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
NSMCE1-209ENST00000565384 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
NSMCE1-209ENST00000565384 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
NSMCE1-209ENST00000565384 MT1EP04732 61 aa4.34□□□□□ -1.71
NSMCE1-209ENST00000565384 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
NSMCE1-209ENST00000565384 ROMO1P60602 79 aa4.29□□□□□ -1.72
NSMCE1-209ENST00000565384 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
NSMCE1-209ENST00000565384 MT4P47944 62 aa4.22□□□□□ -1.73
NSMCE1-209ENST00000565384 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
NSMCE1-209ENST00000565384 MT1GP13640 62 aa4.21□□□□□ -1.74
NSMCE1-209ENST00000565384 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
NSMCE1-209ENST00000565384 TNP1P09430 55 aa4.19□□□□□ -1.74
NSMCE1-209ENST00000565384 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
NSMCE1-209ENST00000565384 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
NSMCE1-209ENST00000565384 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
NSMCE1-209ENST00000565384 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
NSMCE1-209ENST00000565384 MT1MQ8N339 61 aa4.15□□□□□ -1.75
NSMCE1-209ENST00000565384 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
NSMCE1-209ENST00000565384 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
NSMCE1-209ENST00000565384 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
NSMCE1-209ENST00000565384 MT1LQ93083 61 aa4.1□□□□□ -1.75
NSMCE1-209ENST00000565384 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
NSMCE1-209ENST00000565384 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
NSMCE1-209ENST00000565384 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
NSMCE1-209ENST00000565384 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
NSMCE1-209ENST00000565384 LCE3AQ5TA76 89 aa3.99□□□□□ -1.77
NSMCE1-209ENST00000565384 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
NSMCE1-209ENST00000565384 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
NSMCE1-209ENST00000565384 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
NSMCE1-209ENST00000565384 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
NSMCE1-209ENST00000565384 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
NSMCE1-209ENST00000565384 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
NSMCE1-209ENST00000565384 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
NSMCE1-209ENST00000565384 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
NSMCE1-209ENST00000565384 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
NSMCE1-209ENST00000565384 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
NSMCE1-209ENST00000565384 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
NSMCE1-209ENST00000565384 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
NSMCE1-209ENST00000565384 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
NSMCE1-209ENST00000565384 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
NSMCE1-209ENST00000565384 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
NSMCE1-209ENST00000565384 H3BS24 57 aa3.51□□□□□ -1.85
NSMCE1-209ENST00000565384 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
NSMCE1-209ENST00000565384 MT1AP04731 61 aa3.49□□□□□ -1.85
NSMCE1-209ENST00000565384 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
NSMCE1-209ENST00000565384 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
NSMCE1-209ENST00000565384 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
NSMCE1-209ENST00000565384 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
NSMCE1-209ENST00000565384 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
NSMCE1-209ENST00000565384 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
NSMCE1-209ENST00000565384 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
NSMCE1-209ENST00000565384 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
NSMCE1-209ENST00000565384 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
NSMCE1-209ENST00000565384 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
NSMCE1-209ENST00000565384 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
NSMCE1-209ENST00000565384 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
NSMCE1-209ENST00000565384 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
NSMCE1-209ENST00000565384 MT3P25713 68 aa3.2□□□□□ -1.9
NSMCE1-209ENST00000565384 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
NSMCE1-209ENST00000565384 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
NSMCE1-209ENST00000565384 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
NSMCE1-209ENST00000565384 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
NSMCE1-209ENST00000565384 INE1O15225 51 aa2.69□□□□□ -1.98
NSMCE1-209ENST00000565384 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
NSMCE1-209ENST00000565384 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
NSMCE1-209ENST00000565384 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
NSMCE1-209ENST00000565384 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
NSMCE1-209ENST00000565384 LCE1FQ5T754 118 aa2.53□□□□□ -2
NSMCE1-209ENST00000565384 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
NSMCE1-209ENST00000565384 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
NSMCE1-209ENST00000565384 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
NSMCE1-209ENST00000565384 PRM1P04553 51 aa2.23□□□□□ -2.05
NSMCE1-209ENST00000565384 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
NSMCE1-209ENST00000565384 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
NSMCE1-209ENST00000565384 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
NSMCE1-209ENST00000565384 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 149 ms