RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
SPG7-211ENST00000565370 UQCR11O14957 56 aa4.68□□□□□ -1.66
SPG7-211ENST00000565370 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
SPG7-211ENST00000565370 A8MU10 97 aa4.64□□□□□ -1.67
SPG7-211ENST00000565370 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
SPG7-211ENST00000565370 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
SPG7-211ENST00000565370 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
SPG7-211ENST00000565370 MT1EP04732 61 aa4.57□□□□□ -1.68
SPG7-211ENST00000565370 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
SPG7-211ENST00000565370 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
SPG7-211ENST00000565370 KRTAP19-3Q7Z4W3 81 aa4.55□□□□□ -1.68
SPG7-211ENST00000565370 TNP1P09430 55 aa4.54□□□□□ -1.68
SPG7-211ENST00000565370 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
SPG7-211ENST00000565370 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
SPG7-211ENST00000565370 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SPG7-211ENST00000565370 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
SPG7-211ENST00000565370 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
SPG7-211ENST00000565370 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
SPG7-211ENST00000565370 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
SPG7-211ENST00000565370 K7ERS5 55 aa4.44□□□□□ -1.7
SPG7-211ENST00000565370 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
SPG7-211ENST00000565370 MT1GP13640 62 aa4.43□□□□□ -1.7
SPG7-211ENST00000565370 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
SPG7-211ENST00000565370 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
SPG7-211ENST00000565370 MT1LQ93083 61 aa4.38□□□□□ -1.71
SPG7-211ENST00000565370 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
SPG7-211ENST00000565370 MT1MQ8N339 61 aa4.36□□□□□ -1.71
SPG7-211ENST00000565370 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
SPG7-211ENST00000565370 AHNAK2Q8IVF2 5795 aa4.33□□□□□ -1.72
SPG7-211ENST00000565370 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
SPG7-211ENST00000565370 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
SPG7-211ENST00000565370 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
SPG7-211ENST00000565370 ROMO1P60602 79 aa4.29□□□□□ -1.72
SPG7-211ENST00000565370 MT4P47944 62 aa4.26□□□□□ -1.73
SPG7-211ENST00000565370 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
SPG7-211ENST00000565370 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
SPG7-211ENST00000565370 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
SPG7-211ENST00000565370 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
SPG7-211ENST00000565370 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
SPG7-211ENST00000565370 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
SPG7-211ENST00000565370 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
SPG7-211ENST00000565370 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
SPG7-211ENST00000565370 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
SPG7-211ENST00000565370 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
SPG7-211ENST00000565370 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SPG7-211ENST00000565370 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
SPG7-211ENST00000565370 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SPG7-211ENST00000565370 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
SPG7-211ENST00000565370 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
SPG7-211ENST00000565370 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
SPG7-211ENST00000565370 MT1AP04731 61 aa3.75□□□□□ -1.81
SPG7-211ENST00000565370 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SPG7-211ENST00000565370 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
SPG7-211ENST00000565370 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
SPG7-211ENST00000565370 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
SPG7-211ENST00000565370 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SPG7-211ENST00000565370 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
SPG7-211ENST00000565370 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
SPG7-211ENST00000565370 INE1O15225 51 aa3.52□□□□□ -1.85
SPG7-211ENST00000565370 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
SPG7-211ENST00000565370 MT3P25713 68 aa3.44□□□□□ -1.86
SPG7-211ENST00000565370 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
SPG7-211ENST00000565370 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
SPG7-211ENST00000565370 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
SPG7-211ENST00000565370 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SPG7-211ENST00000565370 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
SPG7-211ENST00000565370 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
SPG7-211ENST00000565370 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
SPG7-211ENST00000565370 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SPG7-211ENST00000565370 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
SPG7-211ENST00000565370 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
SPG7-211ENST00000565370 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SPG7-211ENST00000565370 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
SPG7-211ENST00000565370 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
SPG7-211ENST00000565370 PRM1P04553 51 aa2.2□□□□□ -2.06
SPG7-211ENST00000565370 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SPG7-211ENST00000565370 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
SPG7-211ENST00000565370 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms