RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
CX3CL1-203ENST00000564948 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
CX3CL1-203ENST00000564948 TNP1P09430 55 aa5.37□□□□□ -1.55
CX3CL1-203ENST00000564948 MT1MQ8N339 61 aa5.37□□□□□ -1.55
CX3CL1-203ENST00000564948 MT1LQ93083 61 aa5.35□□□□□ -1.55
CX3CL1-203ENST00000564948 K7ERS5 55 aa5.34□□□□□ -1.55
CX3CL1-203ENST00000564948 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
CX3CL1-203ENST00000564948 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
CX3CL1-203ENST00000564948 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
CX3CL1-203ENST00000564948 A6NED7 52 aa5.3□□□□□ -1.56
CX3CL1-203ENST00000564948 MT4P47944 62 aa5.26□□□□□ -1.57
CX3CL1-203ENST00000564948 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
CX3CL1-203ENST00000564948 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
CX3CL1-203ENST00000564948 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
CX3CL1-203ENST00000564948 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
CX3CL1-203ENST00000564948 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
CX3CL1-203ENST00000564948 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
CX3CL1-203ENST00000564948 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
CX3CL1-203ENST00000564948 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CX3CL1-203ENST00000564948 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
CX3CL1-203ENST00000564948 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
CX3CL1-203ENST00000564948 ROMO1P60602 79 aa4.99□□□□□ -1.61
CX3CL1-203ENST00000564948 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
CX3CL1-203ENST00000564948 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
CX3CL1-203ENST00000564948 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
CX3CL1-203ENST00000564948 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
CX3CL1-203ENST00000564948 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
CX3CL1-203ENST00000564948 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CX3CL1-203ENST00000564948 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
CX3CL1-203ENST00000564948 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
CX3CL1-203ENST00000564948 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
CX3CL1-203ENST00000564948 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
CX3CL1-203ENST00000564948 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
CX3CL1-203ENST00000564948 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
CX3CL1-203ENST00000564948 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
CX3CL1-203ENST00000564948 MT1AP04731 61 aa4.57□□□□□ -1.68
CX3CL1-203ENST00000564948 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
CX3CL1-203ENST00000564948 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
CX3CL1-203ENST00000564948 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
CX3CL1-203ENST00000564948 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
CX3CL1-203ENST00000564948 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
CX3CL1-203ENST00000564948 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
CX3CL1-203ENST00000564948 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
CX3CL1-203ENST00000564948 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CX3CL1-203ENST00000564948 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
CX3CL1-203ENST00000564948 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
CX3CL1-203ENST00000564948 MT3P25713 68 aa4.2□□□□□ -1.74
CX3CL1-203ENST00000564948 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CX3CL1-203ENST00000564948 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
CX3CL1-203ENST00000564948 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
CX3CL1-203ENST00000564948 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
CX3CL1-203ENST00000564948 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
CX3CL1-203ENST00000564948 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
CX3CL1-203ENST00000564948 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
CX3CL1-203ENST00000564948 SVIPQ8NHG7 77 aa3.94□□□□□ -1.78
CX3CL1-203ENST00000564948 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
CX3CL1-203ENST00000564948 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
CX3CL1-203ENST00000564948 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
CX3CL1-203ENST00000564948 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CX3CL1-203ENST00000564948 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
CX3CL1-203ENST00000564948 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
CX3CL1-203ENST00000564948 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CX3CL1-203ENST00000564948 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
CX3CL1-203ENST00000564948 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
CX3CL1-203ENST00000564948 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CX3CL1-203ENST00000564948 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CX3CL1-203ENST00000564948 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
CX3CL1-203ENST00000564948 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
CX3CL1-203ENST00000564948 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CX3CL1-203ENST00000564948 H3BS24 57 aa2.75□□□□□ -1.97
CX3CL1-203ENST00000564948 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
CX3CL1-203ENST00000564948 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CX3CL1-203ENST00000564948 PRM1P04553 51 aa2.56□□□□□ -2
CX3CL1-203ENST00000564948 A0A0A0MQY5 61 aa2.54□□□□□ -2
CX3CL1-203ENST00000564948 INE1O15225 51 aa2.5□□□□□ -2.01
CX3CL1-203ENST00000564948 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CX3CL1-203ENST00000564948 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 74.3 ms