RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
SF3B3-205ENST00000564899 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
SF3B3-205ENST00000564899 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
SF3B3-205ENST00000564899 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
SF3B3-205ENST00000564899 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
SF3B3-205ENST00000564899 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
SF3B3-205ENST00000564899 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
SF3B3-205ENST00000564899 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
SF3B3-205ENST00000564899 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
SF3B3-205ENST00000564899 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
SF3B3-205ENST00000564899 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
SF3B3-205ENST00000564899 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
SF3B3-205ENST00000564899 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
SF3B3-205ENST00000564899 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
SF3B3-205ENST00000564899 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
SF3B3-205ENST00000564899 MT1EP04732 61 aa4.06□□□□□ -1.76
SF3B3-205ENST00000564899 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
SF3B3-205ENST00000564899 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
SF3B3-205ENST00000564899 MT1LQ93083 61 aa3.96□□□□□ -1.78
SF3B3-205ENST00000564899 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SF3B3-205ENST00000564899 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
SF3B3-205ENST00000564899 MT1GP13640 62 aa3.88□□□□□ -1.79
SF3B3-205ENST00000564899 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
SF3B3-205ENST00000564899 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
SF3B3-205ENST00000564899 MT4P47944 62 aa3.85□□□□□ -1.79
SF3B3-205ENST00000564899 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
SF3B3-205ENST00000564899 MT1MQ8N339 61 aa3.83□□□□□ -1.8
SF3B3-205ENST00000564899 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
SF3B3-205ENST00000564899 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
SF3B3-205ENST00000564899 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
SF3B3-205ENST00000564899 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
SF3B3-205ENST00000564899 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
SF3B3-205ENST00000564899 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SF3B3-205ENST00000564899 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
SF3B3-205ENST00000564899 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
SF3B3-205ENST00000564899 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
SF3B3-205ENST00000564899 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
SF3B3-205ENST00000564899 LOC100996750A0A140TA64 210 aa3.57□□□□□ -1.84
SF3B3-205ENST00000564899 KRTAP20-2Q3LI61 65 aa3.5□□□□□ -1.85
SF3B3-205ENST00000564899 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
SF3B3-205ENST00000564899 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
SF3B3-205ENST00000564899 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
SF3B3-205ENST00000564899 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
SF3B3-205ENST00000564899 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
SF3B3-205ENST00000564899 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
SF3B3-205ENST00000564899 MT1AP04731 61 aa3.37□□□□□ -1.87
SF3B3-205ENST00000564899 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SF3B3-205ENST00000564899 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
SF3B3-205ENST00000564899 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
SF3B3-205ENST00000564899 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
SF3B3-205ENST00000564899 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
SF3B3-205ENST00000564899 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
SF3B3-205ENST00000564899 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
SF3B3-205ENST00000564899 KRTAP5-2Q701N4 177 aa3.15□□□□□ -1.91
SF3B3-205ENST00000564899 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
SF3B3-205ENST00000564899 MT3P25713 68 aa3.06□□□□□ -1.92
SF3B3-205ENST00000564899 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
SF3B3-205ENST00000564899 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
SF3B3-205ENST00000564899 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
SF3B3-205ENST00000564899 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
SF3B3-205ENST00000564899 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
SF3B3-205ENST00000564899 INE1O15225 51 aa2.69□□□□□ -1.98
SF3B3-205ENST00000564899 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
SF3B3-205ENST00000564899 H3BS24 57 aa2.57□□□□□ -2
SF3B3-205ENST00000564899 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
SF3B3-205ENST00000564899 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
SF3B3-205ENST00000564899 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
SF3B3-205ENST00000564899 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SF3B3-205ENST00000564899 PRM1P04553 51 aa2.33□□□□□ -2.04
SF3B3-205ENST00000564899 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
SF3B3-205ENST00000564899 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
SF3B3-205ENST00000564899 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SF3B3-205ENST00000564899 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
SF3B3-205ENST00000564899 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SF3B3-205ENST00000564899 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SF3B3-205ENST00000564899 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SF3B3-205ENST00000564899 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SF3B3-205ENST00000564899 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 145.1 ms