RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 HMCN1Q96RW7 5635 aa6.63□□□□□ -1.35
SYNGR3-204ENST00000564642 MT1GP13640 62 aa6.62□□□□□ -1.35
SYNGR3-204ENST00000564642 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
SYNGR3-204ENST00000564642 MIR22HGQ0VDD5 57 aa6.57□□□□□ -1.36
SYNGR3-204ENST00000564642 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
SYNGR3-204ENST00000564642 KRTAP5-7Q6L8G8 165 aa6.55□□□□□ -1.36
SYNGR3-204ENST00000564642 MT1LQ93083 61 aa6.53□□□□□ -1.36
SYNGR3-204ENST00000564642 V9GYY9 64 aa6.53□□□□□ -1.36
SYNGR3-204ENST00000564642 SPRR5A0A1B0GTR4 108 aa6.52□□□□□ -1.37
SYNGR3-204ENST00000564642 MT1MQ8N339 61 aa6.48□□□□□ -1.37
SYNGR3-204ENST00000564642 K7ERS5 55 aa6.47□□□□□ -1.37
SYNGR3-204ENST00000564642 PSPHP1O15172 72 aa6.47□□□□□ -1.37
SYNGR3-204ENST00000564642 Q1T7F1 81 aa6.45□□□□□ -1.38
SYNGR3-204ENST00000564642 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
SYNGR3-204ENST00000564642 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
SYNGR3-204ENST00000564642 MT4P47944 62 aa6.37□□□□□ -1.39
SYNGR3-204ENST00000564642 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
SYNGR3-204ENST00000564642 A6NED7 52 aa6.27□□□□□ -1.41
SYNGR3-204ENST00000564642 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
SYNGR3-204ENST00000564642 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
SYNGR3-204ENST00000564642 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
SYNGR3-204ENST00000564642 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
SYNGR3-204ENST00000564642 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
SYNGR3-204ENST00000564642 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
SYNGR3-204ENST00000564642 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
SYNGR3-204ENST00000564642 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
SYNGR3-204ENST00000564642 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
SYNGR3-204ENST00000564642 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
SYNGR3-204ENST00000564642 ROMO1P60602 79 aa5.99□□□□□ -1.45
SYNGR3-204ENST00000564642 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
SYNGR3-204ENST00000564642 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
SYNGR3-204ENST00000564642 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
SYNGR3-204ENST00000564642 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
SYNGR3-204ENST00000564642 AHNAKQ09666 5890 aaKnown RBP5.84□□□□□ -1.47
SYNGR3-204ENST00000564642 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
SYNGR3-204ENST00000564642 KRTAP20-2Q3LI61 65 aa5.78□□□□□ -1.48
SYNGR3-204ENST00000564642 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
SYNGR3-204ENST00000564642 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.5
SYNGR3-204ENST00000564642 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
SYNGR3-204ENST00000564642 MT1AP04731 61 aa5.56□□□□□ -1.52
SYNGR3-204ENST00000564642 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
SYNGR3-204ENST00000564642 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
SYNGR3-204ENST00000564642 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
SYNGR3-204ENST00000564642 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
SYNGR3-204ENST00000564642 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
SYNGR3-204ENST00000564642 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
SYNGR3-204ENST00000564642 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
SYNGR3-204ENST00000564642 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
SYNGR3-204ENST00000564642 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
SYNGR3-204ENST00000564642 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
SYNGR3-204ENST00000564642 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
SYNGR3-204ENST00000564642 MT3P25713 68 aa5.11□□□□□ -1.59
SYNGR3-204ENST00000564642 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
SYNGR3-204ENST00000564642 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SYNGR3-204ENST00000564642 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
SYNGR3-204ENST00000564642 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
SYNGR3-204ENST00000564642 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
SYNGR3-204ENST00000564642 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
SYNGR3-204ENST00000564642 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
SYNGR3-204ENST00000564642 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
SYNGR3-204ENST00000564642 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
SYNGR3-204ENST00000564642 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
SYNGR3-204ENST00000564642 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SYNGR3-204ENST00000564642 H3BS24 57 aa4.06□□□□□ -1.76
SYNGR3-204ENST00000564642 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
SYNGR3-204ENST00000564642 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
SYNGR3-204ENST00000564642 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SYNGR3-204ENST00000564642 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
SYNGR3-204ENST00000564642 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
SYNGR3-204ENST00000564642 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
SYNGR3-204ENST00000564642 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SYNGR3-204ENST00000564642 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
SYNGR3-204ENST00000564642 INE1O15225 51 aa3.41□□□□□ -1.86
SYNGR3-204ENST00000564642 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
SYNGR3-204ENST00000564642 PRM1P04553 51 aa3.07□□□□□ -1.92
SYNGR3-204ENST00000564642 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SYNGR3-204ENST00000564642 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
SYNGR3-204ENST00000564642 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms