RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 KRTAP5-10Q6L8G5 202 aa5.69□□□□□ -1.5
CCNF-203ENST00000564236 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
CCNF-203ENST00000564236 AHNAK2Q8IVF2 5795 aa5.68□□□□□ -1.5
CCNF-203ENST00000564236 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
CCNF-203ENST00000564236 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
CCNF-203ENST00000564236 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
CCNF-203ENST00000564236 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
CCNF-203ENST00000564236 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
CCNF-203ENST00000564236 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
CCNF-203ENST00000564236 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
CCNF-203ENST00000564236 KRTAP20-2Q3LI61 65 aa5.5□□□□□ -1.53
CCNF-203ENST00000564236 KRTAP5-7Q6L8G8 165 aa5.5□□□□□ -1.53
CCNF-203ENST00000564236 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
CCNF-203ENST00000564236 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
CCNF-203ENST00000564236 CCDC179H3BU77 68 aa5.47□□□□□ -1.53
CCNF-203ENST00000564236 UQCR11O14957 56 aa5.43□□□□□ -1.54
CCNF-203ENST00000564236 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
CCNF-203ENST00000564236 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
CCNF-203ENST00000564236 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
CCNF-203ENST00000564236 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
CCNF-203ENST00000564236 TMEM258P61165 79 aa5.3□□□□□ -1.56
CCNF-203ENST00000564236 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
CCNF-203ENST00000564236 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
CCNF-203ENST00000564236 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
CCNF-203ENST00000564236 K7ERS5 55 aa5.19□□□□□ -1.58
CCNF-203ENST00000564236 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
CCNF-203ENST00000564236 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
CCNF-203ENST00000564236 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
CCNF-203ENST00000564236 MT1AP04731 61 aa5.07□□□□□ -1.6
CCNF-203ENST00000564236 PCP4P48539 62 aa5.07□□□□□ -1.6
CCNF-203ENST00000564236 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
CCNF-203ENST00000564236 V9GYY9 64 aa5.06□□□□□ -1.6
CCNF-203ENST00000564236 Q1T7F1 81 aa5.03□□□□□ -1.6
CCNF-203ENST00000564236 KRTAP6-1Q3LI64 71 aa5.02□□□□□ -1.61
CCNF-203ENST00000564236 PSPHP1O15172 72 aa5.01□□□□□ -1.61
CCNF-203ENST00000564236 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
CCNF-203ENST00000564236 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
CCNF-203ENST00000564236 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
CCNF-203ENST00000564236 CDC42SE1Q9NRR8 79 aa4.9□□□□□ -1.63
CCNF-203ENST00000564236 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
CCNF-203ENST00000564236 A6NED7 52 aa4.83□□□□□ -1.64
CCNF-203ENST00000564236 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
CCNF-203ENST00000564236 ROMO1P60602 79 aa4.82□□□□□ -1.64
CCNF-203ENST00000564236 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
CCNF-203ENST00000564236 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
CCNF-203ENST00000564236 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
CCNF-203ENST00000564236 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
CCNF-203ENST00000564236 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
CCNF-203ENST00000564236 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
CCNF-203ENST00000564236 MT3P25713 68 aa4.63□□□□□ -1.67
CCNF-203ENST00000564236 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
CCNF-203ENST00000564236 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
CCNF-203ENST00000564236 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
CCNF-203ENST00000564236 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
CCNF-203ENST00000564236 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
CCNF-203ENST00000564236 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CCNF-203ENST00000564236 BRK1Q8WUW1 75 aa4.01□□□□□ -1.77
CCNF-203ENST00000564236 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
CCNF-203ENST00000564236 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
CCNF-203ENST00000564236 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
CCNF-203ENST00000564236 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
CCNF-203ENST00000564236 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
CCNF-203ENST00000564236 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
CCNF-203ENST00000564236 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CCNF-203ENST00000564236 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CCNF-203ENST00000564236 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
CCNF-203ENST00000564236 H3BS24 57 aa3.39□□□□□ -1.87
CCNF-203ENST00000564236 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
CCNF-203ENST00000564236 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
CCNF-203ENST00000564236 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
CCNF-203ENST00000564236 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CCNF-203ENST00000564236 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
CCNF-203ENST00000564236 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CCNF-203ENST00000564236 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
CCNF-203ENST00000564236 INE1O15225 51 aa2.58□□□□□ -2
CCNF-203ENST00000564236 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
CCNF-203ENST00000564236 PRM1P04553 51 aa2.43□□□□□ -2.02
CCNF-203ENST00000564236 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 92.3 ms