RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 J3QR89 54 aa3.61□□□□□ -1.83
HDGFL3-204ENST00000563790 A0A1B0GV90 55 aa3.6□□□□□ -1.83
HDGFL3-204ENST00000563790 MP68P56378 58 aa3.59□□□□□ -1.83
HDGFL3-204ENST00000563790 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
HDGFL3-204ENST00000563790 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
HDGFL3-204ENST00000563790 C20orf197Q8N268 126 aa3.57□□□□□ -1.84
HDGFL3-204ENST00000563790 LINC00208Q96KT6 92 aa3.57□□□□□ -1.84
HDGFL3-204ENST00000563790 SCGB1A1P11684 91 aa3.54□□□□□ -1.84
HDGFL3-204ENST00000563790 MT1LQ93083 61 aa3.54□□□□□ -1.84
HDGFL3-204ENST00000563790 H3BPC8 53 aa3.53□□□□□ -1.84
HDGFL3-204ENST00000563790 SMIM26A0A096LP01 95 aa3.49□□□□□ -1.85
HDGFL3-204ENST00000563790 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
HDGFL3-204ENST00000563790 DMAC1Q96GE9 116 aa3.47□□□□□ -1.85
HDGFL3-204ENST00000563790 K7ERU9 68 aa3.45□□□□□ -1.86
HDGFL3-204ENST00000563790 SMIM20Q8N5G0 67 aa3.45□□□□□ -1.86
HDGFL3-204ENST00000563790 PSPHP1O15172 72 aa3.44□□□□□ -1.86
HDGFL3-204ENST00000563790 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
HDGFL3-204ENST00000563790 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
HDGFL3-204ENST00000563790 MT-ATP8P03928 68 aa3.41□□□□□ -1.86
HDGFL3-204ENST00000563790 ACYP2P14621 99 aa3.41□□□□□ -1.86
HDGFL3-204ENST00000563790 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
HDGFL3-204ENST00000563790 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.87
HDGFL3-204ENST00000563790 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
HDGFL3-204ENST00000563790 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
HDGFL3-204ENST00000563790 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
HDGFL3-204ENST00000563790 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
HDGFL3-204ENST00000563790 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
HDGFL3-204ENST00000563790 ANAPC13Q9BS18 74 aa3.33□□□□□ -1.88
HDGFL3-204ENST00000563790 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
HDGFL3-204ENST00000563790 A0A0D9SG42 100 aa3.31□□□□□ -1.88
HDGFL3-204ENST00000563790 SERP2Q8N6R1 65 aa3.3□□□□□ -1.88
HDGFL3-204ENST00000563790 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
HDGFL3-204ENST00000563790 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
HDGFL3-204ENST00000563790 COX7CP15954 63 aa3.2□□□□□ -1.9
HDGFL3-204ENST00000563790 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
HDGFL3-204ENST00000563790 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
HDGFL3-204ENST00000563790 COA5Q86WW8 74 aa3.19□□□□□ -1.9
HDGFL3-204ENST00000563790 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
HDGFL3-204ENST00000563790 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
HDGFL3-204ENST00000563790 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
HDGFL3-204ENST00000563790 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
HDGFL3-204ENST00000563790 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
HDGFL3-204ENST00000563790 H7BZZ5 65 aa3.12□□□□□ -1.91
HDGFL3-204ENST00000563790 A0A1B0GU33 70 aa3.1□□□□□ -1.91
HDGFL3-204ENST00000563790 K7ERS5 55 aa3.1□□□□□ -1.91
HDGFL3-204ENST00000563790 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
HDGFL3-204ENST00000563790 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
HDGFL3-204ENST00000563790 A0A1B0GU69 56 aa3.06□□□□□ -1.92
HDGFL3-204ENST00000563790 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
HDGFL3-204ENST00000563790 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
HDGFL3-204ENST00000563790 A6NED7 52 aa3.04□□□□□ -1.92
HDGFL3-204ENST00000563790 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
HDGFL3-204ENST00000563790 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
HDGFL3-204ENST00000563790 CCDC179H3BU77 68 aa3□□□□□ -1.93
HDGFL3-204ENST00000563790 PRR15LQ9BU68 103 aa3□□□□□ -1.93
HDGFL3-204ENST00000563790 MT1AP04731 61 aa2.99□□□□□ -1.93
HDGFL3-204ENST00000563790 TNP1P09430 55 aa2.97□□□□□ -1.93
HDGFL3-204ENST00000563790 A8MU10 97 aa2.94□□□□□ -1.94
HDGFL3-204ENST00000563790 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
HDGFL3-204ENST00000563790 TMEM258P61165 79 aa2.92□□□□□ -1.94
HDGFL3-204ENST00000563790 UQCR11O14957 56 aa2.88□□□□□ -1.95
HDGFL3-204ENST00000563790 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
HDGFL3-204ENST00000563790 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
HDGFL3-204ENST00000563790 KRTAP25-1Q3LHN0 102 aa2.82□□□□□ -1.96
HDGFL3-204ENST00000563790 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
HDGFL3-204ENST00000563790 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
HDGFL3-204ENST00000563790 Q1T7F1 81 aa2.75□□□□□ -1.97
HDGFL3-204ENST00000563790 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
HDGFL3-204ENST00000563790 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
HDGFL3-204ENST00000563790 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
HDGFL3-204ENST00000563790 ROMO1P60602 79 aa2.57□□□□□ -2
HDGFL3-204ENST00000563790 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
HDGFL3-204ENST00000563790 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
HDGFL3-204ENST00000563790 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
HDGFL3-204ENST00000563790 INE1O15225 51 aa2.17□□□□□ -2.06
HDGFL3-204ENST00000563790 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
HDGFL3-204ENST00000563790 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
HDGFL3-204ENST00000563790 PRM1P04553 51 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms