RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
FANCA-209ENST00000562424 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
FANCA-209ENST00000562424 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
FANCA-209ENST00000562424 KRTAP10-12P60413 245 aa4.59□□□□□ -1.67
FANCA-209ENST00000562424 A6NED7 52 aa4.56□□□□□ -1.68
FANCA-209ENST00000562424 UQCR11O14957 56 aa4.55□□□□□ -1.68
FANCA-209ENST00000562424 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
FANCA-209ENST00000562424 A0A1B0GU33 70 aa4.52□□□□□ -1.69
FANCA-209ENST00000562424 CAMK2N1Q7Z7J9 78 aa4.52□□□□□ -1.69
FANCA-209ENST00000562424 SPRR2DP22532 72 aa4.51□□□□□ -1.69
FANCA-209ENST00000562424 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
FANCA-209ENST00000562424 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
FANCA-209ENST00000562424 A0A0D9SG42 100 aa4.49□□□□□ -1.69
FANCA-209ENST00000562424 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
FANCA-209ENST00000562424 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
FANCA-209ENST00000562424 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
FANCA-209ENST00000562424 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
FANCA-209ENST00000562424 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
FANCA-209ENST00000562424 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
FANCA-209ENST00000562424 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
FANCA-209ENST00000562424 A8MU10 97 aa4.35□□□□□ -1.71
FANCA-209ENST00000562424 K7ERS5 55 aa4.33□□□□□ -1.72
FANCA-209ENST00000562424 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
FANCA-209ENST00000562424 PMAIP1Q13794 54 aa4.29□□□□□ -1.72
FANCA-209ENST00000562424 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
FANCA-209ENST00000562424 MT1EP04732 61 aa4.28□□□□□ -1.72
FANCA-209ENST00000562424 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
FANCA-209ENST00000562424 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
FANCA-209ENST00000562424 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
FANCA-209ENST00000562424 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
FANCA-209ENST00000562424 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
FANCA-209ENST00000562424 TNP1P09430 55 aa4.19□□□□□ -1.74
FANCA-209ENST00000562424 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
FANCA-209ENST00000562424 MT1GP13640 62 aa4.14□□□□□ -1.75
FANCA-209ENST00000562424 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
FANCA-209ENST00000562424 ROMO1P60602 79 aa4.11□□□□□ -1.75
FANCA-209ENST00000562424 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
FANCA-209ENST00000562424 MT1LQ93083 61 aa4.1□□□□□ -1.75
FANCA-209ENST00000562424 MT1MQ8N339 61 aa4.07□□□□□ -1.76
FANCA-209ENST00000562424 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
FANCA-209ENST00000562424 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
FANCA-209ENST00000562424 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
FANCA-209ENST00000562424 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
FANCA-209ENST00000562424 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
FANCA-209ENST00000562424 MT4P47944 62 aa3.97□□□□□ -1.77
FANCA-209ENST00000562424 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
FANCA-209ENST00000562424 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
FANCA-209ENST00000562424 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
FANCA-209ENST00000562424 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
FANCA-209ENST00000562424 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
FANCA-209ENST00000562424 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
FANCA-209ENST00000562424 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
FANCA-209ENST00000562424 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
FANCA-209ENST00000562424 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
FANCA-209ENST00000562424 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
FANCA-209ENST00000562424 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
FANCA-209ENST00000562424 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
FANCA-209ENST00000562424 MT1AP04731 61 aa3.49□□□□□ -1.85
FANCA-209ENST00000562424 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
FANCA-209ENST00000562424 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
FANCA-209ENST00000562424 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
FANCA-209ENST00000562424 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
FANCA-209ENST00000562424 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
FANCA-209ENST00000562424 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
FANCA-209ENST00000562424 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
FANCA-209ENST00000562424 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
FANCA-209ENST00000562424 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
FANCA-209ENST00000562424 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
FANCA-209ENST00000562424 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
FANCA-209ENST00000562424 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
FANCA-209ENST00000562424 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
FANCA-209ENST00000562424 INE1O15225 51 aa2.71□□□□□ -1.98
FANCA-209ENST00000562424 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
FANCA-209ENST00000562424 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
FANCA-209ENST00000562424 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
FANCA-209ENST00000562424 PRM1P04553 51 aa2.11□□□□□ -2.07
FANCA-209ENST00000562424 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
FANCA-209ENST00000562424 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 80.3 ms