RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 KRTAP10-5P60370 271 aa2.47□□□□□ -2.01
LINC01963-201ENST00000562038 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
LINC01963-201ENST00000562038 KRTAP12-2P59991 146 aa2.45□□□□□ -2.02
LINC01963-201ENST00000562038 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
LINC01963-201ENST00000562038 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
LINC01963-201ENST00000562038 INE1O15225 51 aa2.37□□□□□ -2.03
LINC01963-201ENST00000562038 MT1XP80297 61 aa2.36□□□□□ -2.03
LINC01963-201ENST00000562038 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
LINC01963-201ENST00000562038 SPRR2EP22531 72 aa2.34□□□□□ -2.03
LINC01963-201ENST00000562038 SPRR2BP35325 72 aa2.34□□□□□ -2.03
LINC01963-201ENST00000562038 SPRR2AP35326 72 aa2.34□□□□□ -2.03
LINC01963-201ENST00000562038 LCE3BQ5TA77 95 aa2.34□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP4-8Q9BYQ9 185 aa2.32□□□□□ -2.04
LINC01963-201ENST00000562038 SPRR2DP22532 72 aa2.31□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
LINC01963-201ENST00000562038 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
LINC01963-201ENST00000562038 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
LINC01963-201ENST00000562038 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
LINC01963-201ENST00000562038 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
LINC01963-201ENST00000562038 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
LINC01963-201ENST00000562038 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
LINC01963-201ENST00000562038 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
LINC01963-201ENST00000562038 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
LINC01963-201ENST00000562038 TNP1P09430 55 aa2.17□□□□□ -2.06
LINC01963-201ENST00000562038 KRTAP8-1Q8IUC2 63 aa2.17□□□□□ -2.06
LINC01963-201ENST00000562038 KRTAP4-8A0A0G2JLE6 195 aa2.17□□□□□ -2.06
LINC01963-201ENST00000562038 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
LINC01963-201ENST00000562038 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
LINC01963-201ENST00000562038 LCE3CQ5T5A8 94 aa2.15□□□□□ -2.06
LINC01963-201ENST00000562038 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
LINC01963-201ENST00000562038 SPRR2FQ96RM1 72 aa2.14□□□□□ -2.07
LINC01963-201ENST00000562038 KRTAP4-7Q9BYR0 210 aa2.11□□□□□ -2.07
LINC01963-201ENST00000562038 MT1EP04732 61 aa2.11□□□□□ -2.07
LINC01963-201ENST00000562038 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
LINC01963-201ENST00000562038 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
LINC01963-201ENST00000562038 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
LINC01963-201ENST00000562038 MT1GP13640 62 aa2.07□□□□□ -2.08
LINC01963-201ENST00000562038 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
LINC01963-201ENST00000562038 KRTAP4-9Q9BYQ8 210 aa2.07□□□□□ -2.08
LINC01963-201ENST00000562038 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
LINC01963-201ENST00000562038 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
LINC01963-201ENST00000562038 MT1LQ93083 61 aa2.03□□□□□ -2.08
LINC01963-201ENST00000562038 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
LINC01963-201ENST00000562038 KRTAP12-3P60328 96 aa2□□□□□ -2.09
LINC01963-201ENST00000562038 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
LINC01963-201ENST00000562038 MT1MQ8N339 61 aa1.98□□□□□ -2.09
LINC01963-201ENST00000562038 MT3P25713 68 aa1.96□□□□□ -2.1
LINC01963-201ENST00000562038 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
LINC01963-201ENST00000562038 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
LINC01963-201ENST00000562038 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
LINC01963-201ENST00000562038 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
LINC01963-201ENST00000562038 MT4P47944 62 aa1.85□□□□□ -2.11
LINC01963-201ENST00000562038 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
LINC01963-201ENST00000562038 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.11
LINC01963-201ENST00000562038 KRTAP5-2Q701N4 177 aa1.84□□□□□ -2.11
LINC01963-201ENST00000562038 DSTQ03001 7570 aaKnown RBP1.83□□□□□ -2.12
LINC01963-201ENST00000562038 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
LINC01963-201ENST00000562038 MT1AP04731 61 aa1.79□□□□□ -2.12
LINC01963-201ENST00000562038 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
LINC01963-201ENST00000562038 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
LINC01963-201ENST00000562038 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
LINC01963-201ENST00000562038 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
LINC01963-201ENST00000562038 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
LINC01963-201ENST00000562038 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.17
LINC01963-201ENST00000562038 PRM1P04553 51 aa1.44□□□□□ -2.18
LINC01963-201ENST00000562038 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
LINC01963-201ENST00000562038 LCE1CQ5T751 118 aa1.41□□□□□ -2.18
LINC01963-201ENST00000562038 LCE1BQ5T7P3 118 aa1.41□□□□□ -2.18
LINC01963-201ENST00000562038 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
LINC01963-201ENST00000562038 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
LINC01963-201ENST00000562038 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
LINC01963-201ENST00000562038 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
LINC01963-201ENST00000562038 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 78.5 ms