RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 SPRR2BP35325 72 aa3.02□□□□□ -1.93
ZEB1-223ENST00000561304 SPRR2AP35326 72 aa3.02□□□□□ -1.93
ZEB1-223ENST00000561304 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
ZEB1-223ENST00000561304 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
ZEB1-223ENST00000561304 KRTAP8-1Q8IUC2 63 aa3.01□□□□□ -1.93
ZEB1-223ENST00000561304 PMAIP1Q13794 54 aa3□□□□□ -1.93
ZEB1-223ENST00000561304 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
ZEB1-223ENST00000561304 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
ZEB1-223ENST00000561304 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
ZEB1-223ENST00000561304 SPANXA2-OT1Q8N9U9 137 aa2.97□□□□□ -1.93
ZEB1-223ENST00000561304 ACYP2P14621 99 aa2.95□□□□□ -1.94
ZEB1-223ENST00000561304 Q1T7F1 81 aa2.94□□□□□ -1.94
ZEB1-223ENST00000561304 SPRR2DP22532 72 aa2.92□□□□□ -1.94
ZEB1-223ENST00000561304 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
ZEB1-223ENST00000561304 SPTSSBQ8NFR3 76 aa2.9□□□□□ -1.94
ZEB1-223ENST00000561304 CHKB-CPT1BH3BT56 60 aa2.89□□□□□ -1.95
ZEB1-223ENST00000561304 K7ERS5 55 aa2.89□□□□□ -1.95
ZEB1-223ENST00000561304 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
ZEB1-223ENST00000561304 BRK1Q8WUW1 75 aa2.87□□□□□ -1.95
ZEB1-223ENST00000561304 COA5Q86WW8 74 aa2.84□□□□□ -1.96
ZEB1-223ENST00000561304 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
ZEB1-223ENST00000561304 A6NED7 52 aa2.81□□□□□ -1.96
ZEB1-223ENST00000561304 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
ZEB1-223ENST00000561304 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
ZEB1-223ENST00000561304 A8MU10 97 aa2.79□□□□□ -1.96
ZEB1-223ENST00000561304 A0A0D9SG42 100 aa2.77□□□□□ -1.97
ZEB1-223ENST00000561304 MT1EP04732 61 aa2.77□□□□□ -1.97
ZEB1-223ENST00000561304 SPATA8Q6RVD6 105 aa2.77□□□□□ -1.97
ZEB1-223ENST00000561304 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
ZEB1-223ENST00000561304 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
ZEB1-223ENST00000561304 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
ZEB1-223ENST00000561304 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
ZEB1-223ENST00000561304 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
ZEB1-223ENST00000561304 A0A1B0GU69 56 aa2.72□□□□□ -1.97
ZEB1-223ENST00000561304 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
ZEB1-223ENST00000561304 A0A1B0GU33 70 aa2.71□□□□□ -1.98
ZEB1-223ENST00000561304 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
ZEB1-223ENST00000561304 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
ZEB1-223ENST00000561304 UQCR11O14957 56 aa2.69□□□□□ -1.98
ZEB1-223ENST00000561304 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.98
ZEB1-223ENST00000561304 MT1GP13640 62 aa2.64□□□□□ -1.99
ZEB1-223ENST00000561304 MT1MQ8N339 61 aa2.64□□□□□ -1.99
ZEB1-223ENST00000561304 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
ZEB1-223ENST00000561304 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
ZEB1-223ENST00000561304 MT1LQ93083 61 aa2.63□□□□□ -1.99
ZEB1-223ENST00000561304 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
ZEB1-223ENST00000561304 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
ZEB1-223ENST00000561304 KRTAP25-1Q3LHN0 102 aa2.61□□□□□ -1.99
ZEB1-223ENST00000561304 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
ZEB1-223ENST00000561304 HMCN1Q96RW7 5635 aa2.59□□□□□ -2
ZEB1-223ENST00000561304 MT4P47944 62 aa2.57□□□□□ -2
ZEB1-223ENST00000561304 TNP1P09430 55 aa2.56□□□□□ -2
ZEB1-223ENST00000561304 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
ZEB1-223ENST00000561304 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
ZEB1-223ENST00000561304 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
ZEB1-223ENST00000561304 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
ZEB1-223ENST00000561304 ROMO1P60602 79 aa2.43□□□□□ -2.02
ZEB1-223ENST00000561304 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.02
ZEB1-223ENST00000561304 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
ZEB1-223ENST00000561304 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
ZEB1-223ENST00000561304 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
ZEB1-223ENST00000561304 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
ZEB1-223ENST00000561304 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
ZEB1-223ENST00000561304 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
ZEB1-223ENST00000561304 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
ZEB1-223ENST00000561304 MT1AP04731 61 aa2.23□□□□□ -2.05
ZEB1-223ENST00000561304 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
ZEB1-223ENST00000561304 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
ZEB1-223ENST00000561304 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
ZEB1-223ENST00000561304 INE1O15225 51 aa2.06□□□□□ -2.08
ZEB1-223ENST00000561304 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
ZEB1-223ENST00000561304 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
ZEB1-223ENST00000561304 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
ZEB1-223ENST00000561304 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
ZEB1-223ENST00000561304 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ZEB1-223ENST00000561304 PRM1P04553 51 aa1.25□□□□□ -2.21
ZEB1-223ENST00000561304 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
ZEB1-223ENST00000561304 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 138.3 ms