RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	SPRR2B	P35325	72 aa		2.91	□□□□□ -1.94
MARK3-223	ENST00000561071	SPRR2A	P35326	72 aa		2.91	□□□□□ -1.94
MARK3-223	ENST00000561071	KRTAP2-4	Q9BYR9	128 aa		2.91	□□□□□ -1.94
MARK3-223	ENST00000561071		P0C880	135 aa		2.9	□□□□□ -1.95
MARK3-223	ENST00000561071	PLAC4	Q8WY50	150 aa		2.9	□□□□□ -1.95
MARK3-223	ENST00000561071	PRO2289	Q9P1D8	64 aa		2.9	□□□□□ -1.95
MARK3-223	ENST00000561071		V9GYY9	64 aa		2.89	□□□□□ -1.95
MARK3-223	ENST00000561071	KRTAP8-1	Q8IUC2	63 aa		2.88	□□□□□ -1.95
MARK3-223	ENST00000561071		H3BPC8	53 aa		2.87	□□□□□ -1.95
MARK3-223	ENST00000561071		Q1T7F1	81 aa		2.87	□□□□□ -1.95
MARK3-223	ENST00000561071	SNURF	Q9Y675	71 aa		2.87	□□□□□ -1.95
MARK3-223	ENST00000561071		R4GN34	69 aa		2.87	□□□□□ -1.95
MARK3-223	ENST00000561071		M0QZ58	72 aa		2.86	□□□□□ -1.95
MARK3-223	ENST00000561071	MP68	P56378	58 aa		2.86	□□□□□ -1.95
MARK3-223	ENST00000561071	LINC01554	Q52M75	96 aa		2.86	□□□□□ -1.95
MARK3-223	ENST00000561071	SPANXA2-OT1	Q8N9U9	137 aa		2.84	□□□□□ -1.95
MARK3-223	ENST00000561071	BRK1	Q8WUW1	75 aa		2.84	□□□□□ -1.95
MARK3-223	ENST00000561071	DMAC1	Q96GE9	116 aa		2.82	□□□□□ -1.96
MARK3-223	ENST00000561071	SPRR2D	P22532	72 aa		2.81	□□□□□ -1.96
MARK3-223	ENST00000561071	KRTAP2-1	Q9BYU5	128 aa		2.8	□□□□□ -1.96
MARK3-223	ENST00000561071	PMAIP1	Q13794	54 aa		2.79	□□□□□ -1.96
MARK3-223	ENST00000561071	ACYP2	P14621	99 aa		2.73	□□□□□ -1.97
MARK3-223	ENST00000561071	SPINT4	Q6UDR6	99 aa		2.73	□□□□□ -1.97
MARK3-223	ENST00000561071	KTN1-AS1	Q86SY8	53 aa		2.73	□□□□□ -1.97
MARK3-223	ENST00000561071	PSPHP1	O15172	72 aa		2.71	□□□□□ -1.98
MARK3-223	ENST00000561071	CDC42SE1	Q9NRR8	79 aa		2.71	□□□□□ -1.98
MARK3-223	ENST00000561071	LINC01558	Q9Y6Z2	57 aa		2.71	□□□□□ -1.98
MARK3-223	ENST00000561071	CHKB-CPT1B	H3BT56	60 aa		2.7	□□□□□ -1.98
MARK3-223	ENST00000561071	COA5	Q86WW8	74 aa		2.7	□□□□□ -1.98
MARK3-223	ENST00000561071	KRTAP13-4	Q3LI77	160 aa		2.69	□□□□□ -1.98
MARK3-223	ENST00000561071	SPTSSB	Q8NFR3	76 aa		2.69	□□□□□ -1.98
MARK3-223	ENST00000561071	PRR15L	Q9BU68	103 aa		2.69	□□□□□ -1.98
MARK3-223	ENST00000561071		A6NED7	52 aa		2.68	□□□□□ -1.98
MARK3-223	ENST00000561071	LUZP6	Q538Z0	58 aa		2.68	□□□□□ -1.98
MARK3-223	ENST00000561071	GPR98	Q8WXG9	6306 aa		2.65	□□□□□ -1.98
MARK3-223	ENST00000561071	KRTAP5-8	O75690	187 aa		2.65	□□□□□ -1.99
MARK3-223	ENST00000561071	DST	Q03001	7570 aa	Known RBP	2.64	□□□□□ -1.99
MARK3-223	ENST00000561071	KRTAP19-7	Q3SYF9	63 aa		2.63	□□□□□ -1.99
MARK3-223	ENST00000561071		A0A0D9SG42	100 aa		2.6	□□□□□ -1.99
MARK3-223	ENST00000561071	MT1E	P04732	61 aa		2.6	□□□□□ -1.99
MARK3-223	ENST00000561071	KRTAP19-3	Q7Z4W3	81 aa		2.58	□□□□□ -2
MARK3-223	ENST00000561071	SPATA8	Q6RVD6	105 aa		2.57	□□□□□ -2
MARK3-223	ENST00000561071		A0A1B0GU69	56 aa		2.56	□□□□□ -2
MARK3-223	ENST00000561071	UQCR11	O14957	56 aa		2.56	□□□□□ -2
MARK3-223	ENST00000561071	KRTAP19-5	Q3LI72	72 aa		2.56	□□□□□ -2
MARK3-223	ENST00000561071	KRTAP5-7	Q6L8G8	165 aa		2.55	□□□□□ -2
MARK3-223	ENST00000561071	KRTAP12-3	P60328	96 aa		2.53	□□□□□ -2
MARK3-223	ENST00000561071	MIR22HG	Q0VDD5	57 aa		2.53	□□□□□ -2
MARK3-223	ENST00000561071		A0A1B0GU33	70 aa		2.52	□□□□□ -2.01
MARK3-223	ENST00000561071	KRTAP12-1	P59990	96 aa		2.52	□□□□□ -2.01
MARK3-223	ENST00000561071	HMCN1	Q96RW7	5635 aa		2.51	□□□□□ -2.01
MARK3-223	ENST00000561071	MT1G	P13640	62 aa		2.5	□□□□□ -2.01
MARK3-223	ENST00000561071	MT4	P47944	62 aa		2.49	□□□□□ -2.01
MARK3-223	ENST00000561071	MT1M	Q8N339	61 aa		2.48	□□□□□ -2.01
MARK3-223	ENST00000561071	MUC19	Q7Z5P9	8384 aa		2.48	□□□□□ -2.01
MARK3-223	ENST00000561071	MT1L	Q93083	61 aa		2.47	□□□□□ -2.01
MARK3-223	ENST00000561071	AHNAK2	Q8IVF2	5795 aa		2.46	□□□□□ -2.02
MARK3-223	ENST00000561071	KRTAP12-4	P60329	112 aa		2.44	□□□□□ -2.02
MARK3-223	ENST00000561071	C10orf95	Q9H7T3	257 aa		2.44	□□□□□ -2.02
MARK3-223	ENST00000561071		K7ERS5	55 aa		2.43	□□□□□ -2.02
MARK3-223	ENST00000561071	TNP1	P09430	55 aa		2.4	□□□□□ -2.03
MARK3-223	ENST00000561071	KRTAP25-1	Q3LHN0	102 aa		2.4	□□□□□ -2.03
MARK3-223	ENST00000561071	KRTAP5-10	Q6L8G5	202 aa		2.36	□□□□□ -2.03
MARK3-223	ENST00000561071	ROMO1	P60602	79 aa		2.35	□□□□□ -2.03
MARK3-223	ENST00000561071	KRTAP20-2	Q3LI61	65 aa		2.28	□□□□□ -2.04
MARK3-223	ENST00000561071	SYNE1	Q8NF91	8797 aa	Known RBP	2.21	□□□□□ -2.06
MARK3-223	ENST00000561071	KRTAP21-2	Q3LI59	83 aa		2.16	□□□□□ -2.06
MARK3-223	ENST00000561071	KRTAP6-1	Q3LI64	71 aa		2.11	□□□□□ -2.07
MARK3-223	ENST00000561071	MT1A	P04731	61 aa		2.09	□□□□□ -2.07
MARK3-223	ENST00000561071	AHNAK	Q09666	5890 aa	Known RBP	2.07	□□□□□ -2.08
MARK3-223	ENST00000561071	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.05	□□□□□ -2.08
MARK3-223	ENST00000561071	KRTAP6-2	Q3LI66	62 aa		2.04	□□□□□ -2.08
MARK3-223	ENST00000561071	MUC5AC	P98088	5654 aa		2.03	□□□□□ -2.09
MARK3-223	ENST00000561071	INE1	O15225	51 aa		1.87	□□□□□ -2.11
MARK3-223	ENST00000561071	PHGR1	C9JFL3	82 aa		1.39	□□□□□ -2.19
MARK3-223	ENST00000561071	MUC16	Q8WXI7	14507 aa		1.19	□□□□□ -2.22
MARK3-223	ENST00000561071	PRM1	P04553	51 aa		1.19	□□□□□ -2.22
MARK3-223	ENST00000561071	KRTAP21-1	Q3LI58	79 aa		1.03	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 55.3 ms