RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 A0A1B0GU33 70 aa6.38□□□□□ -1.39
CRNDE-210ENST00000560912 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
CRNDE-210ENST00000560912 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
CRNDE-210ENST00000560912 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
CRNDE-210ENST00000560912 TNP1P09430 55 aa6.3□□□□□ -1.4
CRNDE-210ENST00000560912 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
CRNDE-210ENST00000560912 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
CRNDE-210ENST00000560912 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
CRNDE-210ENST00000560912 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
CRNDE-210ENST00000560912 A8MU10 97 aa6.18□□□□□ -1.42
CRNDE-210ENST00000560912 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
CRNDE-210ENST00000560912 K7ERU9 68 aa6.09□□□□□ -1.43
CRNDE-210ENST00000560912 A0A1B0GU69 56 aa6.04□□□□□ -1.44
CRNDE-210ENST00000560912 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
CRNDE-210ENST00000560912 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
CRNDE-210ENST00000560912 H7BZZ5 65 aa5.92□□□□□ -1.46
CRNDE-210ENST00000560912 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
CRNDE-210ENST00000560912 COX7CP15954 63 aa5.87□□□□□ -1.47
CRNDE-210ENST00000560912 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
CRNDE-210ENST00000560912 MUC5ACP98088 5654 aa5.82□□□□□ -1.48
CRNDE-210ENST00000560912 KRTAP5-8O75690 187 aa5.8□□□□□ -1.48
CRNDE-210ENST00000560912 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
CRNDE-210ENST00000560912 MUC5BQ9HC84 5762 aaPredicted RBP5.74□□□□□ -1.49
CRNDE-210ENST00000560912 MT1AP04731 61 aa5.72□□□□□ -1.49
CRNDE-210ENST00000560912 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
CRNDE-210ENST00000560912 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
CRNDE-210ENST00000560912 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
CRNDE-210ENST00000560912 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
CRNDE-210ENST00000560912 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
CRNDE-210ENST00000560912 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
CRNDE-210ENST00000560912 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
CRNDE-210ENST00000560912 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
CRNDE-210ENST00000560912 UQCR11O14957 56 aa5.52□□□□□ -1.53
CRNDE-210ENST00000560912 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
CRNDE-210ENST00000560912 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
CRNDE-210ENST00000560912 ATP5EP56381 51 aaPredicted RBP5.4□□□□□ -1.54
CRNDE-210ENST00000560912 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
CRNDE-210ENST00000560912 KRTAP5-1Q6L8H4 278 aa5.35□□□□□ -1.55
CRNDE-210ENST00000560912 ANAPC13Q9BS18 74 aa5.35□□□□□ -1.55
CRNDE-210ENST00000560912 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
CRNDE-210ENST00000560912 K7ERS5 55 aa5.3□□□□□ -1.56
CRNDE-210ENST00000560912 MT3P25713 68 aa5.22□□□□□ -1.57
CRNDE-210ENST00000560912 TMEM258P61165 79 aa5.07□□□□□ -1.6
CRNDE-210ENST00000560912 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
CRNDE-210ENST00000560912 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
CRNDE-210ENST00000560912 PSPHP1O15172 72 aa4.96□□□□□ -1.62
CRNDE-210ENST00000560912 Q1T7F1 81 aa4.96□□□□□ -1.62
CRNDE-210ENST00000560912 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
CRNDE-210ENST00000560912 ROMO1P60602 79 aa4.88□□□□□ -1.63
CRNDE-210ENST00000560912 V9GYY9 64 aa4.87□□□□□ -1.63
CRNDE-210ENST00000560912 H3BS24 57 aa4.84□□□□□ -1.63
CRNDE-210ENST00000560912 A6NED7 52 aa4.75□□□□□ -1.65
CRNDE-210ENST00000560912 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
CRNDE-210ENST00000560912 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
CRNDE-210ENST00000560912 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
CRNDE-210ENST00000560912 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
CRNDE-210ENST00000560912 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
CRNDE-210ENST00000560912 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
CRNDE-210ENST00000560912 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CRNDE-210ENST00000560912 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
CRNDE-210ENST00000560912 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
CRNDE-210ENST00000560912 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
CRNDE-210ENST00000560912 BRK1Q8WUW1 75 aa3.46□□□□□ -1.86
CRNDE-210ENST00000560912 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
CRNDE-210ENST00000560912 PCP4P48539 62 aa3.43□□□□□ -1.86
CRNDE-210ENST00000560912 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
CRNDE-210ENST00000560912 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
CRNDE-210ENST00000560912 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
CRNDE-210ENST00000560912 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
CRNDE-210ENST00000560912 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
CRNDE-210ENST00000560912 SVIPQ8NHG7 77 aa2.76□□□□□ -1.97
CRNDE-210ENST00000560912 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
CRNDE-210ENST00000560912 PRM1P04553 51 aa2.48□□□□□ -2.01
CRNDE-210ENST00000560912 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
CRNDE-210ENST00000560912 PRO0628Q9UI54 55 aa2.45□□□□□ -2.02
CRNDE-210ENST00000560912 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
CRNDE-210ENST00000560912 INE1O15225 51 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 134.5 ms