RNA–Protein interactions for RNA: ENST00000560595.5

ETFA-215, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 1 (best)

Gene ETFA, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-215ENST00000560595 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
ETFA-215ENST00000560595 KRTAP2-2Q9BYT5 123 aa7.38□□□□□ -1.23
ETFA-215ENST00000560595 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
ETFA-215ENST00000560595 MT1LQ93083 61 aa7.31□□□□□ -1.24
ETFA-215ENST00000560595 MT1GP13640 62 aa7.3□□□□□ -1.24
ETFA-215ENST00000560595 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
ETFA-215ENST00000560595 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
ETFA-215ENST00000560595 DSTQ03001 7570 aaKnown RBP7.24□□□□□ -1.25
ETFA-215ENST00000560595 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
ETFA-215ENST00000560595 MT1MQ8N339 61 aa7.21□□□□□ -1.26
ETFA-215ENST00000560595 ROMO1P60602 79 aa7.13□□□□□ -1.27
ETFA-215ENST00000560595 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
ETFA-215ENST00000560595 KRTAP4-3Q9BYR4 195 aa7.05□□□□□ -1.28
ETFA-215ENST00000560595 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
ETFA-215ENST00000560595 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
ETFA-215ENST00000560595 BRK1Q8WUW1 75 aa6.82□□□□□ -1.32
ETFA-215ENST00000560595 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
ETFA-215ENST00000560595 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
ETFA-215ENST00000560595 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
ETFA-215ENST00000560595 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
ETFA-215ENST00000560595 KRTAP5-4Q6L8H1 288 aa6.69□□□□□ -1.34
ETFA-215ENST00000560595 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
ETFA-215ENST00000560595 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.35
ETFA-215ENST00000560595 MT4P47944 62 aa6.64□□□□□ -1.35
ETFA-215ENST00000560595 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
ETFA-215ENST00000560595 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.35
ETFA-215ENST00000560595 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
ETFA-215ENST00000560595 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
ETFA-215ENST00000560595 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
ETFA-215ENST00000560595 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
ETFA-215ENST00000560595 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
ETFA-215ENST00000560595 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
ETFA-215ENST00000560595 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
ETFA-215ENST00000560595 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
ETFA-215ENST00000560595 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
ETFA-215ENST00000560595 MT1AP04731 61 aa6.22□□□□□ -1.41
ETFA-215ENST00000560595 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
ETFA-215ENST00000560595 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
ETFA-215ENST00000560595 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
ETFA-215ENST00000560595 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
ETFA-215ENST00000560595 KRTAP5-10Q6L8G5 202 aa6.04□□□□□ -1.44
ETFA-215ENST00000560595 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
ETFA-215ENST00000560595 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
ETFA-215ENST00000560595 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
ETFA-215ENST00000560595 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
ETFA-215ENST00000560595 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
ETFA-215ENST00000560595 MT3P25713 68 aa5.66□□□□□ -1.5
ETFA-215ENST00000560595 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
ETFA-215ENST00000560595 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
ETFA-215ENST00000560595 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
ETFA-215ENST00000560595 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
ETFA-215ENST00000560595 H3BS24 57 aa5.32□□□□□ -1.56
ETFA-215ENST00000560595 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
ETFA-215ENST00000560595 KRTAP5-1Q6L8H4 278 aa5.25□□□□□ -1.57
ETFA-215ENST00000560595 MUC5BQ9HC84 5762 aaPredicted RBP5.17□□□□□ -1.58
ETFA-215ENST00000560595 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.59
ETFA-215ENST00000560595 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
ETFA-215ENST00000560595 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
ETFA-215ENST00000560595 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
ETFA-215ENST00000560595 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
ETFA-215ENST00000560595 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
ETFA-215ENST00000560595 LCE1BQ5T7P3 118 aa4.82□□□□□ -1.64
ETFA-215ENST00000560595 LCE1CQ5T751 118 aa4.75□□□□□ -1.65
ETFA-215ENST00000560595 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
ETFA-215ENST00000560595 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
ETFA-215ENST00000560595 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
ETFA-215ENST00000560595 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
ETFA-215ENST00000560595 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
ETFA-215ENST00000560595 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
ETFA-215ENST00000560595 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
ETFA-215ENST00000560595 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
ETFA-215ENST00000560595 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
ETFA-215ENST00000560595 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
ETFA-215ENST00000560595 PRM1P04553 51 aa3.67□□□□□ -1.82
ETFA-215ENST00000560595 INE1O15225 51 aa3.53□□□□□ -1.84
ETFA-215ENST00000560595 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
ETFA-215ENST00000560595 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
ETFA-215ENST00000560595 MUC16Q8WXI7 14507 aa2.38□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 96 ms