RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
PSME1-207ENST00000560420 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
PSME1-207ENST00000560420 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
PSME1-207ENST00000560420 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
PSME1-207ENST00000560420 Q1T7F1 81 aa5.06□□□□□ -1.6
PSME1-207ENST00000560420 V9GYY9 64 aa5.03□□□□□ -1.6
PSME1-207ENST00000560420 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
PSME1-207ENST00000560420 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
PSME1-207ENST00000560420 PSPHP1O15172 72 aa5□□□□□ -1.61
PSME1-207ENST00000560420 LCE1DQ5T752 114 aa5□□□□□ -1.61
PSME1-207ENST00000560420 KRTAP5-4Q6L8H1 288 aa5□□□□□ -1.61
PSME1-207ENST00000560420 GPR98Q8WXG9 6306 aa5□□□□□ -1.61
PSME1-207ENST00000560420 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
PSME1-207ENST00000560420 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
PSME1-207ENST00000560420 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
PSME1-207ENST00000560420 K7ERS5 55 aa4.91□□□□□ -1.62
PSME1-207ENST00000560420 MT4P47944 62 aa4.89□□□□□ -1.63
PSME1-207ENST00000560420 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
PSME1-207ENST00000560420 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
PSME1-207ENST00000560420 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
PSME1-207ENST00000560420 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
PSME1-207ENST00000560420 A6NED7 52 aa4.81□□□□□ -1.64
PSME1-207ENST00000560420 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
PSME1-207ENST00000560420 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
PSME1-207ENST00000560420 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
PSME1-207ENST00000560420 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
PSME1-207ENST00000560420 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
PSME1-207ENST00000560420 ROMO1P60602 79 aa4.67□□□□□ -1.66
PSME1-207ENST00000560420 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
PSME1-207ENST00000560420 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
PSME1-207ENST00000560420 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
PSME1-207ENST00000560420 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
PSME1-207ENST00000560420 SYNE1Q8NF91 8797 aaKnown RBP4.62□□□□□ -1.67
PSME1-207ENST00000560420 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
PSME1-207ENST00000560420 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
PSME1-207ENST00000560420 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
PSME1-207ENST00000560420 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
PSME1-207ENST00000560420 MT1AP04731 61 aa4.46□□□□□ -1.7
PSME1-207ENST00000560420 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
PSME1-207ENST00000560420 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
PSME1-207ENST00000560420 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
PSME1-207ENST00000560420 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
PSME1-207ENST00000560420 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
PSME1-207ENST00000560420 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
PSME1-207ENST00000560420 KRTAP5-8O75690 187 aa4.13□□□□□ -1.75
PSME1-207ENST00000560420 BRK1Q8WUW1 75 aa4.13□□□□□ -1.75
PSME1-207ENST00000560420 MT3P25713 68 aa4.04□□□□□ -1.76
PSME1-207ENST00000560420 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
PSME1-207ENST00000560420 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
PSME1-207ENST00000560420 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
PSME1-207ENST00000560420 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
PSME1-207ENST00000560420 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
PSME1-207ENST00000560420 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
PSME1-207ENST00000560420 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
PSME1-207ENST00000560420 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
PSME1-207ENST00000560420 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
PSME1-207ENST00000560420 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
PSME1-207ENST00000560420 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
PSME1-207ENST00000560420 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
PSME1-207ENST00000560420 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
PSME1-207ENST00000560420 H3BS24 57 aa3.46□□□□□ -1.86
PSME1-207ENST00000560420 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
PSME1-207ENST00000560420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
PSME1-207ENST00000560420 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
PSME1-207ENST00000560420 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
PSME1-207ENST00000560420 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
PSME1-207ENST00000560420 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
PSME1-207ENST00000560420 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
PSME1-207ENST00000560420 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
PSME1-207ENST00000560420 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
PSME1-207ENST00000560420 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
PSME1-207ENST00000560420 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
PSME1-207ENST00000560420 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
PSME1-207ENST00000560420 INE1O15225 51 aa2.56□□□□□ -2
PSME1-207ENST00000560420 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
PSME1-207ENST00000560420 PRM1P04553 51 aa2.39□□□□□ -2.03
PSME1-207ENST00000560420 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
PSME1-207ENST00000560420 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms