RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
SNRPA1-209ENST00000560307 LPAP08519 4548 aa2.45□□□□□ -2.02
SNRPA1-209ENST00000560307 KRTAP4-1Q9BYQ7 146 aa2.45□□□□□ -2.02
SNRPA1-209ENST00000560307 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
SNRPA1-209ENST00000560307 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
SNRPA1-209ENST00000560307 RYR3Q15413 4870 aa2.36□□□□□ -2.03
SNRPA1-209ENST00000560307 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
SNRPA1-209ENST00000560307 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
SNRPA1-209ENST00000560307 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.05
SNRPA1-209ENST00000560307 KIAA1109Q2LD37 5005 aa2.26□□□□□ -2.05
SNRPA1-209ENST00000560307 KRTAP10-10P60014 251 aa2.26□□□□□ -2.05
SNRPA1-209ENST00000560307 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
SNRPA1-209ENST00000560307 MT1XP80297 61 aa2.22□□□□□ -2.05
SNRPA1-209ENST00000560307 ABCA13Q86UQ4 5058 aa2.22□□□□□ -2.05
SNRPA1-209ENST00000560307 MT2AP02795 61 aa2.2□□□□□ -2.06
SNRPA1-209ENST00000560307 MT1BP07438 61 aa2.2□□□□□ -2.06
SNRPA1-209ENST00000560307 MT1FP04733 61 aa2.19□□□□□ -2.06
SNRPA1-209ENST00000560307 HERC2O95714 4834 aa2.19□□□□□ -2.06
SNRPA1-209ENST00000560307 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
SNRPA1-209ENST00000560307 MT1HP80294 61 aa2.17□□□□□ -2.06
SNRPA1-209ENST00000560307 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
SNRPA1-209ENST00000560307 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
SNRPA1-209ENST00000560307 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
SNRPA1-209ENST00000560307 M0R2T5 61 aa2.15□□□□□ -2.07
SNRPA1-209ENST00000560307 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SNRPA1-209ENST00000560307 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
SNRPA1-209ENST00000560307 PCLOQ9Y6V0 5065 aa2.09□□□□□ -2.07
SNRPA1-209ENST00000560307 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
SNRPA1-209ENST00000560307 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SNRPA1-209ENST00000560307 UBR4Q5T4S7 5183 aa2□□□□□ -2.09
SNRPA1-209ENST00000560307 KRTAP19-7Q3SYF9 63 aa1.98□□□□□ -2.09
SNRPA1-209ENST00000560307 MUC2Q02817 5179 aa1.97□□□□□ -2.09
SNRPA1-209ENST00000560307 MT1EP04732 61 aa1.95□□□□□ -2.1
SNRPA1-209ENST00000560307 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
SNRPA1-209ENST00000560307 MT1LQ93083 61 aa1.95□□□□□ -2.1
SNRPA1-209ENST00000560307 RNF213Q63HN8 5207 aa1.91□□□□□ -2.1
SNRPA1-209ENST00000560307 FAT4Q6V0I7 4981 aa1.91□□□□□ -2.1
SNRPA1-209ENST00000560307 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
SNRPA1-209ENST00000560307 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
SNRPA1-209ENST00000560307 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
SNRPA1-209ENST00000560307 MT1AP04731 61 aa1.83□□□□□ -2.12
SNRPA1-209ENST00000560307 MT1GP13640 62 aa1.79□□□□□ -2.12
SNRPA1-209ENST00000560307 MT1MQ8N339 61 aa1.78□□□□□ -2.12
SNRPA1-209ENST00000560307 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
SNRPA1-209ENST00000560307 KRTAP19-6Q3LI70 58 aa1.73□□□□□ -2.13
SNRPA1-209ENST00000560307 PRM1P04553 51 aa1.69□□□□□ -2.14
SNRPA1-209ENST00000560307 USH2AO75445 5202 aa1.68□□□□□ -2.14
SNRPA1-209ENST00000560307 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
SNRPA1-209ENST00000560307 KMT2DO14686 5537 aa1.66□□□□□ -2.14
SNRPA1-209ENST00000560307 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
SNRPA1-209ENST00000560307 CRCT1Q9UGL9 99 aa1.64□□□□□ -2.15
SNRPA1-209ENST00000560307 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
SNRPA1-209ENST00000560307 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
SNRPA1-209ENST00000560307 SPRR2AP35326 72 aa1.57□□□□□ -2.16
SNRPA1-209ENST00000560307 SPRR2EP22531 72 aa1.52□□□□□ -2.17
SNRPA1-209ENST00000560307 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
SNRPA1-209ENST00000560307 SPRR2BP35325 72 aa1.5□□□□□ -2.17
SNRPA1-209ENST00000560307 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
SNRPA1-209ENST00000560307 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
SNRPA1-209ENST00000560307 SPRR2DP22532 72 aa1.43□□□□□ -2.18
SNRPA1-209ENST00000560307 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
SNRPA1-209ENST00000560307 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
SNRPA1-209ENST00000560307 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
SNRPA1-209ENST00000560307 MUC5ACP98088 5654 aa1.19□□□□□ -2.22
SNRPA1-209ENST00000560307 KRTAP20-2Q3LI61 65 aa1.18□□□□□ -2.22
SNRPA1-209ENST00000560307 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SNRPA1-209ENST00000560307 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.23
SNRPA1-209ENST00000560307 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
SNRPA1-209ENST00000560307 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
SNRPA1-209ENST00000560307 KRTAP20-1Q3LI63 56 aa1.09□□□□□ -2.23
SNRPA1-209ENST00000560307 MT4P47944 62 aa1.06□□□□□ -2.24
SNRPA1-209ENST00000560307 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
SNRPA1-209ENST00000560307 NEBP20929 6669 aa0.93□□□□□ -2.26
SNRPA1-209ENST00000560307 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
SNRPA1-209ENST00000560307 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
SNRPA1-209ENST00000560307 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
SNRPA1-209ENST00000560307 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
SNRPA1-209ENST00000560307 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 93 ms