RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
PSEN1-225ENST00000560005 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
PSEN1-225ENST00000560005 TNP1P09430 55 aa8.22□□□□□ -1.09
PSEN1-225ENST00000560005 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-225ENST00000560005 KRTAP4-9Q9BYQ8 210 aa8.07□□□□□ -1.12
PSEN1-225ENST00000560005 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
PSEN1-225ENST00000560005 KRTAP23-1A1A580 65 aa8.03□□□□□ -1.12
PSEN1-225ENST00000560005 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
PSEN1-225ENST00000560005 SVIPQ8NHG7 77 aa8.02□□□□□ -1.13
PSEN1-225ENST00000560005 PP632Q6XCG6 107 aa8□□□□□ -1.13
PSEN1-225ENST00000560005 LCE1DQ5T752 114 aa7.79□□□□□ -1.16
PSEN1-225ENST00000560005 HMCN1Q96RW7 5635 aa7.78□□□□□ -1.16
PSEN1-225ENST00000560005 LCE5AQ5TCM9 118 aa7.75□□□□□ -1.17
PSEN1-225ENST00000560005 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
PSEN1-225ENST00000560005 AHNAK2Q8IVF2 5795 aa7.71□□□□□ -1.17
PSEN1-225ENST00000560005 KRTAP19-3Q7Z4W3 81 aa7.64□□□□□ -1.19
PSEN1-225ENST00000560005 MT4P47944 62 aa7.63□□□□□ -1.19
PSEN1-225ENST00000560005 KRTAP19-7Q3SYF9 63 aa7.59□□□□□ -1.19
PSEN1-225ENST00000560005 KRTAP5-10Q6L8G5 202 aa7.57□□□□□ -1.2
PSEN1-225ENST00000560005 MT1EP04732 61 aa7.56□□□□□ -1.2
PSEN1-225ENST00000560005 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
PSEN1-225ENST00000560005 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
PSEN1-225ENST00000560005 KRTAP19-5Q3LI72 72 aa7.43□□□□□ -1.22
PSEN1-225ENST00000560005 MT1GP13640 62 aa7.36□□□□□ -1.23
PSEN1-225ENST00000560005 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
PSEN1-225ENST00000560005 KRTAP5-7Q6L8G8 165 aa7.36□□□□□ -1.23
PSEN1-225ENST00000560005 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
PSEN1-225ENST00000560005 KRTAP5-4Q6L8H1 288 aa7.3□□□□□ -1.24
PSEN1-225ENST00000560005 KRTAP19-4Q3LI73 84 aa7.28□□□□□ -1.24
PSEN1-225ENST00000560005 MT1MQ8N339 61 aa7.25□□□□□ -1.25
PSEN1-225ENST00000560005 KRTAP5-3Q6L8H2 238 aa7.24□□□□□ -1.25
PSEN1-225ENST00000560005 KRTAP4-3Q9BYR4 195 aa7.14□□□□□ -1.27
PSEN1-225ENST00000560005 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
PSEN1-225ENST00000560005 MT1LQ93083 61 aa7.11□□□□□ -1.27
PSEN1-225ENST00000560005 LCE3CQ5T5A8 94 aa7.01□□□□□ -1.29
PSEN1-225ENST00000560005 KRTAP20-2Q3LI61 65 aa6.95□□□□□ -1.3
PSEN1-225ENST00000560005 LUZP6Q538Z0 58 aa6.8□□□□□ -1.32
PSEN1-225ENST00000560005 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
PSEN1-225ENST00000560005 KRTAP5-5Q701N2 237 aaPredicted RBP6.71□□□□□ -1.34
PSEN1-225ENST00000560005 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
PSEN1-225ENST00000560005 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
PSEN1-225ENST00000560005 AHNAKQ09666 5890 aaKnown RBP6.55□□□□□ -1.36
PSEN1-225ENST00000560005 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
PSEN1-225ENST00000560005 MUC5ACP98088 5654 aa6.49□□□□□ -1.37
PSEN1-225ENST00000560005 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
PSEN1-225ENST00000560005 MUC5BQ9HC84 5762 aaPredicted RBP6.46□□□□□ -1.38
PSEN1-225ENST00000560005 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
PSEN1-225ENST00000560005 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
PSEN1-225ENST00000560005 KRTAP5-8O75690 187 aa6.33□□□□□ -1.4
PSEN1-225ENST00000560005 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
PSEN1-225ENST00000560005 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
PSEN1-225ENST00000560005 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
PSEN1-225ENST00000560005 MT1AP04731 61 aa6.07□□□□□ -1.44
PSEN1-225ENST00000560005 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
PSEN1-225ENST00000560005 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
PSEN1-225ENST00000560005 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
PSEN1-225ENST00000560005 A0A0A0MQY5 61 aa5.78□□□□□ -1.48
PSEN1-225ENST00000560005 KRTAP5-1Q6L8H4 278 aa5.76□□□□□ -1.49
PSEN1-225ENST00000560005 MT3P25713 68 aa5.56□□□□□ -1.52
PSEN1-225ENST00000560005 H3BS24 57 aa5.46□□□□□ -1.54
PSEN1-225ENST00000560005 INE1O15225 51 aa5.45□□□□□ -1.54
PSEN1-225ENST00000560005 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
PSEN1-225ENST00000560005 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
PSEN1-225ENST00000560005 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
PSEN1-225ENST00000560005 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
PSEN1-225ENST00000560005 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
PSEN1-225ENST00000560005 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
PSEN1-225ENST00000560005 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
PSEN1-225ENST00000560005 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
PSEN1-225ENST00000560005 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
PSEN1-225ENST00000560005 PHGR1C9JFL3 82 aa4.45□□□□□ -1.7
PSEN1-225ENST00000560005 PRM1P04553 51 aa4.36□□□□□ -1.71
PSEN1-225ENST00000560005 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
PSEN1-225ENST00000560005 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
PSEN1-225ENST00000560005 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
PSEN1-225ENST00000560005 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
PSEN1-225ENST00000560005 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
PSEN1-225ENST00000560005 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 223 ms