RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 A8MU10 97 aa8.26□□□□□ -1.09
PBX1-217ENST00000559578 H7BZZ5 65 aa8.25□□□□□ -1.09
PBX1-217ENST00000559578 TNP1P09430 55 aa8.21□□□□□ -1.1
PBX1-217ENST00000559578 KRTAP5-7Q6L8G8 165 aa8.06□□□□□ -1.12
PBX1-217ENST00000559578 KRTAP5-3Q6L8H2 238 aa8.04□□□□□ -1.12
PBX1-217ENST00000559578 KRTAP4-7Q9BYR0 210 aa8.02□□□□□ -1.13
PBX1-217ENST00000559578 KRTAP12-3P60328 96 aa7.95□□□□□ -1.14
PBX1-217ENST00000559578 KRTAP20-2Q3LI61 65 aa7.94□□□□□ -1.14
PBX1-217ENST00000559578 PRR15LQ9BU68 103 aa7.91□□□□□ -1.14
PBX1-217ENST00000559578 SPRR5A0A1B0GTR4 108 aa7.87□□□□□ -1.15
PBX1-217ENST00000559578 KRTAP5-5Q701N2 237 aaPredicted RBP7.85□□□□□ -1.15
PBX1-217ENST00000559578 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
PBX1-217ENST00000559578 KRTAP12-4P60329 112 aa7.81□□□□□ -1.16
PBX1-217ENST00000559578 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
PBX1-217ENST00000559578 CCDC179H3BU77 68 aa7.71□□□□□ -1.18
PBX1-217ENST00000559578 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
PBX1-217ENST00000559578 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
PBX1-217ENST00000559578 UQCR11O14957 56 aa7.63□□□□□ -1.19
PBX1-217ENST00000559578 SYNE1Q8NF91 8797 aaKnown RBP7.57□□□□□ -1.2
PBX1-217ENST00000559578 KRTAP25-1Q3LHN0 102 aa7.57□□□□□ -1.2
PBX1-217ENST00000559578 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
PBX1-217ENST00000559578 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
PBX1-217ENST00000559578 K7ERS5 55 aa7.37□□□□□ -1.23
PBX1-217ENST00000559578 KRTAP4-11Q9BYQ6 195 aa7.37□□□□□ -1.23
PBX1-217ENST00000559578 TMEM258P61165 79 aa7.36□□□□□ -1.23
PBX1-217ENST00000559578 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
PBX1-217ENST00000559578 LCE3CQ5T5A8 94 aa7.28□□□□□ -1.24
PBX1-217ENST00000559578 KRTAP5-2Q701N4 177 aa7.25□□□□□ -1.25
PBX1-217ENST00000559578 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
PBX1-217ENST00000559578 MT1AP04731 61 aa7.2□□□□□ -1.26
PBX1-217ENST00000559578 KRTAP6-1Q3LI64 71 aa7.17□□□□□ -1.26
PBX1-217ENST00000559578 PSPHP1O15172 72 aa7.14□□□□□ -1.27
PBX1-217ENST00000559578 KRTAP5-8O75690 187 aa7.11□□□□□ -1.27
PBX1-217ENST00000559578 V9GYY9 64 aa7.05□□□□□ -1.28
PBX1-217ENST00000559578 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
PBX1-217ENST00000559578 MUC5ACP98088 5654 aa6.98□□□□□ -1.29
PBX1-217ENST00000559578 AHNAKQ09666 5890 aaKnown RBP6.97□□□□□ -1.29
PBX1-217ENST00000559578 Q1T7F1 81 aa6.97□□□□□ -1.29
PBX1-217ENST00000559578 KRTAP6-2Q3LI66 62 aa6.95□□□□□ -1.3
PBX1-217ENST00000559578 MUC5BQ9HC84 5762 aaPredicted RBP6.94□□□□□ -1.3
PBX1-217ENST00000559578 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
PBX1-217ENST00000559578 OBSCNQ5VST9 7968 aa6.89□□□□□ -1.31
PBX1-217ENST00000559578 A6NED7 52 aa6.87□□□□□ -1.31
PBX1-217ENST00000559578 KRTAP9-6A8MVA2 160 aa6.87□□□□□ -1.31
PBX1-217ENST00000559578 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
PBX1-217ENST00000559578 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
PBX1-217ENST00000559578 ROMO1P60602 79 aa6.79□□□□□ -1.32
PBX1-217ENST00000559578 MT3P25713 68 aa6.63□□□□□ -1.35
PBX1-217ENST00000559578 KRTAP5-1Q6L8H4 278 aa6.59□□□□□ -1.35
PBX1-217ENST00000559578 LCE1EQ5T753 118 aa6.18□□□□□ -1.42
PBX1-217ENST00000559578 PCP4P48539 62 aa5.9□□□□□ -1.46
PBX1-217ENST00000559578 LCE1BQ5T7P3 118 aa5.86□□□□□ -1.47
PBX1-217ENST00000559578 KRTAP4-2Q9BYR5 136 aa5.85□□□□□ -1.47
PBX1-217ENST00000559578 LCE1CQ5T751 118 aa5.73□□□□□ -1.49
PBX1-217ENST00000559578 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
PBX1-217ENST00000559578 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
PBX1-217ENST00000559578 KRTAP5-11Q6L8G4 156 aa5.22□□□□□ -1.57
PBX1-217ENST00000559578 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
PBX1-217ENST00000559578 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
PBX1-217ENST00000559578 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.15□□□□□ -1.59
PBX1-217ENST00000559578 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
PBX1-217ENST00000559578 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
PBX1-217ENST00000559578 PHGR1C9JFL3 82 aa4.89□□□□□ -1.63
PBX1-217ENST00000559578 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
PBX1-217ENST00000559578 KRTAP21-2Q3LI59 83 aa4.73□□□□□ -1.65
PBX1-217ENST00000559578 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
PBX1-217ENST00000559578 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
PBX1-217ENST00000559578 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
PBX1-217ENST00000559578 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
PBX1-217ENST00000559578 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
PBX1-217ENST00000559578 H3BS24 57 aa4.25□□□□□ -1.73
PBX1-217ENST00000559578 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
PBX1-217ENST00000559578 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
PBX1-217ENST00000559578 PRM1P04553 51 aa3.47□□□□□ -1.85
PBX1-217ENST00000559578 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
PBX1-217ENST00000559578 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
PBX1-217ENST00000559578 MUC16Q8WXI7 14507 aa2.97□□□□□ -1.93
PBX1-217ENST00000559578 INE1O15225 51 aa2.72□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 68.7 ms