RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PSPHP1O15172 72 aa4.44□□□□□ -1.7
RABGGTA-207ENST00000558936 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
RABGGTA-207ENST00000558936 MIR22HGQ0VDD5 57 aa4.42□□□□□ -1.7
RABGGTA-207ENST00000558936 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
RABGGTA-207ENST00000558936 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
RABGGTA-207ENST00000558936 V9GYY9 64 aa4.37□□□□□ -1.71
RABGGTA-207ENST00000558936 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
RABGGTA-207ENST00000558936 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
RABGGTA-207ENST00000558936 PCP4P48539 62 aa4.3□□□□□ -1.72
RABGGTA-207ENST00000558936 K7ERS5 55 aa4.29□□□□□ -1.72
RABGGTA-207ENST00000558936 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
RABGGTA-207ENST00000558936 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
RABGGTA-207ENST00000558936 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
RABGGTA-207ENST00000558936 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
RABGGTA-207ENST00000558936 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
RABGGTA-207ENST00000558936 A6NED7 52 aa4.21□□□□□ -1.74
RABGGTA-207ENST00000558936 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
RABGGTA-207ENST00000558936 MT4P47944 62 aa4.19□□□□□ -1.74
RABGGTA-207ENST00000558936 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
RABGGTA-207ENST00000558936 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
RABGGTA-207ENST00000558936 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
RABGGTA-207ENST00000558936 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
RABGGTA-207ENST00000558936 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
RABGGTA-207ENST00000558936 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
RABGGTA-207ENST00000558936 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
RABGGTA-207ENST00000558936 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
RABGGTA-207ENST00000558936 ROMO1P60602 79 aa4.05□□□□□ -1.76
RABGGTA-207ENST00000558936 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
RABGGTA-207ENST00000558936 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
RABGGTA-207ENST00000558936 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
RABGGTA-207ENST00000558936 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
RABGGTA-207ENST00000558936 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
RABGGTA-207ENST00000558936 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
RABGGTA-207ENST00000558936 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
RABGGTA-207ENST00000558936 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
RABGGTA-207ENST00000558936 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
RABGGTA-207ENST00000558936 MT1AP04731 61 aa3.82□□□□□ -1.8
RABGGTA-207ENST00000558936 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
RABGGTA-207ENST00000558936 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
RABGGTA-207ENST00000558936 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
RABGGTA-207ENST00000558936 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
RABGGTA-207ENST00000558936 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
RABGGTA-207ENST00000558936 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
RABGGTA-207ENST00000558936 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
RABGGTA-207ENST00000558936 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
RABGGTA-207ENST00000558936 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.85
RABGGTA-207ENST00000558936 MT3P25713 68 aa3.46□□□□□ -1.86
RABGGTA-207ENST00000558936 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
RABGGTA-207ENST00000558936 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
RABGGTA-207ENST00000558936 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
RABGGTA-207ENST00000558936 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
RABGGTA-207ENST00000558936 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
RABGGTA-207ENST00000558936 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
RABGGTA-207ENST00000558936 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
RABGGTA-207ENST00000558936 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
RABGGTA-207ENST00000558936 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
RABGGTA-207ENST00000558936 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
RABGGTA-207ENST00000558936 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
RABGGTA-207ENST00000558936 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
RABGGTA-207ENST00000558936 SVIPQ8NHG7 77 aa2.89□□□□□ -1.95
RABGGTA-207ENST00000558936 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
RABGGTA-207ENST00000558936 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
RABGGTA-207ENST00000558936 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
RABGGTA-207ENST00000558936 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
RABGGTA-207ENST00000558936 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
RABGGTA-207ENST00000558936 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
RABGGTA-207ENST00000558936 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
RABGGTA-207ENST00000558936 LCE1FQ5T754 118 aa2.57□□□□□ -2
RABGGTA-207ENST00000558936 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
RABGGTA-207ENST00000558936 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
RABGGTA-207ENST00000558936 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
RABGGTA-207ENST00000558936 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
RABGGTA-207ENST00000558936 PRM1P04553 51 aa2.13□□□□□ -2.07
RABGGTA-207ENST00000558936 A0A0A0MQY5 61 aa1.88□□□□□ -2.11
RABGGTA-207ENST00000558936 INE1O15225 51 aa1.78□□□□□ -2.12
RABGGTA-207ENST00000558936 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
RABGGTA-207ENST00000558936 H3BS24 57 aa1.7□□□□□ -2.14
RABGGTA-207ENST00000558936 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 158.1 ms