RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
MARK3-213ENST00000558611 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
MARK3-213ENST00000558611 COX7CP15954 63 aa4.03□□□□□ -1.76
MARK3-213ENST00000558611 MT1XP80297 61 aa4.01□□□□□ -1.77
MARK3-213ENST00000558611 LCE3AQ5TA76 89 aa4□□□□□ -1.77
MARK3-213ENST00000558611 Q1T7F1 81 aa3.97□□□□□ -1.77
MARK3-213ENST00000558611 COA5Q86WW8 74 aa3.97□□□□□ -1.77
MARK3-213ENST00000558611 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
MARK3-213ENST00000558611 H7BZZ5 65 aa3.95□□□□□ -1.78
MARK3-213ENST00000558611 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
MARK3-213ENST00000558611 KMT2DO14686 5537 aa3.92□□□□□ -1.78
MARK3-213ENST00000558611 KRTAP13-4Q3LI77 160 aa3.9□□□□□ -1.79
MARK3-213ENST00000558611 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
MARK3-213ENST00000558611 CCDC179H3BU77 68 aa3.84□□□□□ -1.79
MARK3-213ENST00000558611 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
MARK3-213ENST00000558611 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
MARK3-213ENST00000558611 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
MARK3-213ENST00000558611 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
MARK3-213ENST00000558611 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
MARK3-213ENST00000558611 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
MARK3-213ENST00000558611 ROMO1P60602 79 aa3.81□□□□□ -1.8
MARK3-213ENST00000558611 NEBP20929 6669 aa3.8□□□□□ -1.8
MARK3-213ENST00000558611 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
MARK3-213ENST00000558611 ATP5EP56381 51 aaPredicted RBP3.79□□□□□ -1.8
MARK3-213ENST00000558611 A0A0D9SG42 100 aa3.78□□□□□ -1.8
MARK3-213ENST00000558611 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
MARK3-213ENST00000558611 A0A1B0GU69 56 aa3.77□□□□□ -1.81
MARK3-213ENST00000558611 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
MARK3-213ENST00000558611 SPRR2EP22531 72 aa3.75□□□□□ -1.81
MARK3-213ENST00000558611 SPRR2BP35325 72 aa3.75□□□□□ -1.81
MARK3-213ENST00000558611 SPRR2AP35326 72 aa3.75□□□□□ -1.81
MARK3-213ENST00000558611 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
MARK3-213ENST00000558611 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
MARK3-213ENST00000558611 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
MARK3-213ENST00000558611 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
MARK3-213ENST00000558611 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
MARK3-213ENST00000558611 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
MARK3-213ENST00000558611 SPRR2DP22532 72 aa3.62□□□□□ -1.83
MARK3-213ENST00000558611 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
MARK3-213ENST00000558611 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
MARK3-213ENST00000558611 UQCR11O14957 56 aa3.56□□□□□ -1.84
MARK3-213ENST00000558611 MT1EP04732 61 aa3.55□□□□□ -1.84
MARK3-213ENST00000558611 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
MARK3-213ENST00000558611 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
MARK3-213ENST00000558611 TNP1P09430 55 aa3.51□□□□□ -1.85
MARK3-213ENST00000558611 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
MARK3-213ENST00000558611 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
MARK3-213ENST00000558611 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
MARK3-213ENST00000558611 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
MARK3-213ENST00000558611 INE1O15225 51 aa3.44□□□□□ -1.86
MARK3-213ENST00000558611 MT1GP13640 62 aa3.42□□□□□ -1.86
MARK3-213ENST00000558611 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
MARK3-213ENST00000558611 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
MARK3-213ENST00000558611 MT1LQ93083 61 aa3.41□□□□□ -1.86
MARK3-213ENST00000558611 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
MARK3-213ENST00000558611 MT1MQ8N339 61 aa3.37□□□□□ -1.87
MARK3-213ENST00000558611 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
MARK3-213ENST00000558611 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
MARK3-213ENST00000558611 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
MARK3-213ENST00000558611 MT4P47944 62 aa3.15□□□□□ -1.91
MARK3-213ENST00000558611 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
MARK3-213ENST00000558611 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
MARK3-213ENST00000558611 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
MARK3-213ENST00000558611 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
MARK3-213ENST00000558611 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
MARK3-213ENST00000558611 MT1AP04731 61 aa2.9□□□□□ -1.95
MARK3-213ENST00000558611 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
MARK3-213ENST00000558611 SYNE1Q8NF91 8797 aaKnown RBP2.87□□□□□ -1.95
MARK3-213ENST00000558611 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
MARK3-213ENST00000558611 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
MARK3-213ENST00000558611 MUC5ACP98088 5654 aa2.53□□□□□ -2
MARK3-213ENST00000558611 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
MARK3-213ENST00000558611 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
MARK3-213ENST00000558611 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
MARK3-213ENST00000558611 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
MARK3-213ENST00000558611 PRM1P04553 51 aa1.63□□□□□ -2.15
MARK3-213ENST00000558611 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
MARK3-213ENST00000558611 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 868.4 ms