RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 KRTAP25-1Q3LHN0 102 aa5.78□□□□□ -1.48
RABGGTA-205ENST00000558534 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
RABGGTA-205ENST00000558534 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RABGGTA-205ENST00000558534 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
RABGGTA-205ENST00000558534 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
RABGGTA-205ENST00000558534 MT1GP13640 62 aa5.72□□□□□ -1.49
RABGGTA-205ENST00000558534 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
RABGGTA-205ENST00000558534 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
RABGGTA-205ENST00000558534 MT1LQ93083 61 aa5.62□□□□□ -1.51
RABGGTA-205ENST00000558534 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
RABGGTA-205ENST00000558534 MT1MQ8N339 61 aa5.56□□□□□ -1.52
RABGGTA-205ENST00000558534 ROMO1P60602 79 aa5.53□□□□□ -1.52
RABGGTA-205ENST00000558534 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
RABGGTA-205ENST00000558534 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
RABGGTA-205ENST00000558534 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
RABGGTA-205ENST00000558534 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
RABGGTA-205ENST00000558534 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
RABGGTA-205ENST00000558534 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
RABGGTA-205ENST00000558534 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
RABGGTA-205ENST00000558534 BRK1Q8WUW1 75 aa5.22□□□□□ -1.57
RABGGTA-205ENST00000558534 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
RABGGTA-205ENST00000558534 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
RABGGTA-205ENST00000558534 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
RABGGTA-205ENST00000558534 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
RABGGTA-205ENST00000558534 MT4P47944 62 aa5.14□□□□□ -1.59
RABGGTA-205ENST00000558534 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
RABGGTA-205ENST00000558534 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
RABGGTA-205ENST00000558534 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
RABGGTA-205ENST00000558534 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
RABGGTA-205ENST00000558534 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
RABGGTA-205ENST00000558534 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
RABGGTA-205ENST00000558534 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.62
RABGGTA-205ENST00000558534 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
RABGGTA-205ENST00000558534 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
RABGGTA-205ENST00000558534 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
RABGGTA-205ENST00000558534 MT1AP04731 61 aa4.82□□□□□ -1.64
RABGGTA-205ENST00000558534 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
RABGGTA-205ENST00000558534 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
RABGGTA-205ENST00000558534 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
RABGGTA-205ENST00000558534 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
RABGGTA-205ENST00000558534 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
RABGGTA-205ENST00000558534 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
RABGGTA-205ENST00000558534 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
RABGGTA-205ENST00000558534 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
RABGGTA-205ENST00000558534 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
RABGGTA-205ENST00000558534 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
RABGGTA-205ENST00000558534 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
RABGGTA-205ENST00000558534 MT3P25713 68 aa4.45□□□□□ -1.7
RABGGTA-205ENST00000558534 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
RABGGTA-205ENST00000558534 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
RABGGTA-205ENST00000558534 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
RABGGTA-205ENST00000558534 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
RABGGTA-205ENST00000558534 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
RABGGTA-205ENST00000558534 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
RABGGTA-205ENST00000558534 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
RABGGTA-205ENST00000558534 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
RABGGTA-205ENST00000558534 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
RABGGTA-205ENST00000558534 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
RABGGTA-205ENST00000558534 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
RABGGTA-205ENST00000558534 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
RABGGTA-205ENST00000558534 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
RABGGTA-205ENST00000558534 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
RABGGTA-205ENST00000558534 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
RABGGTA-205ENST00000558534 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
RABGGTA-205ENST00000558534 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
RABGGTA-205ENST00000558534 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
RABGGTA-205ENST00000558534 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
RABGGTA-205ENST00000558534 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
RABGGTA-205ENST00000558534 H3BS24 57 aa3.23□□□□□ -1.89
RABGGTA-205ENST00000558534 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
RABGGTA-205ENST00000558534 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
RABGGTA-205ENST00000558534 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
RABGGTA-205ENST00000558534 INE1O15225 51 aa2.81□□□□□ -1.96
RABGGTA-205ENST00000558534 PRM1P04553 51 aa2.78□□□□□ -1.96
RABGGTA-205ENST00000558534 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
RABGGTA-205ENST00000558534 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
RABGGTA-205ENST00000558534 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
RABGGTA-205ENST00000558534 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 111.1 ms