RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 MT1BP07438 61 aa2.12□□□□□ -2.07
GABPB1-207ENST00000558335 MT1XP80297 61 aa2.12□□□□□ -2.07
GABPB1-207ENST00000558335 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
GABPB1-207ENST00000558335 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
GABPB1-207ENST00000558335 KRTAP2-2Q9BYT5 123 aa2.07□□□□□ -2.08
GABPB1-207ENST00000558335 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
GABPB1-207ENST00000558335 MUC2Q02817 5179 aa2.04□□□□□ -2.08
GABPB1-207ENST00000558335 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
GABPB1-207ENST00000558335 FAT4Q6V0I7 4981 aa2□□□□□ -2.09
GABPB1-207ENST00000558335 KRTAP2-3P0C7H8 128 aa1.99□□□□□ -2.09
GABPB1-207ENST00000558335 KRTAP2-4Q9BYR9 128 aa1.99□□□□□ -2.09
GABPB1-207ENST00000558335 KRTAP2-1Q9BYU5 128 aa1.99□□□□□ -2.09
GABPB1-207ENST00000558335 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
GABPB1-207ENST00000558335 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
GABPB1-207ENST00000558335 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
GABPB1-207ENST00000558335 MT3P25713 68 aa1.89□□□□□ -2.11
GABPB1-207ENST00000558335 MT1EP04732 61 aa1.87□□□□□ -2.11
GABPB1-207ENST00000558335 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
GABPB1-207ENST00000558335 MT1LQ93083 61 aa1.86□□□□□ -2.11
GABPB1-207ENST00000558335 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
GABPB1-207ENST00000558335 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
GABPB1-207ENST00000558335 MT1GP13640 62 aa1.82□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP9-6A8MVA2 160 aa1.8□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP5-9P26371 169 aa1.78□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
GABPB1-207ENST00000558335 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
GABPB1-207ENST00000558335 MT1MQ8N339 61 aa1.73□□□□□ -2.13
GABPB1-207ENST00000558335 USH2AO75445 5202 aa1.71□□□□□ -2.14
GABPB1-207ENST00000558335 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
GABPB1-207ENST00000558335 MT1AP04731 61 aa1.7□□□□□ -2.14
GABPB1-207ENST00000558335 LCE1FQ5T754 118 aa1.65□□□□□ -2.15
GABPB1-207ENST00000558335 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
GABPB1-207ENST00000558335 KMT2DO14686 5537 aa1.62□□□□□ -2.15
GABPB1-207ENST00000558335 OBSCNQ5VST9 7968 aa1.62□□□□□ -2.15
GABPB1-207ENST00000558335 PRM1P04553 51 aa1.6□□□□□ -2.15
GABPB1-207ENST00000558335 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
GABPB1-207ENST00000558335 KRTAP4-3Q9BYR4 195 aa1.6□□□□□ -2.15
GABPB1-207ENST00000558335 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
GABPB1-207ENST00000558335 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
GABPB1-207ENST00000558335 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
GABPB1-207ENST00000558335 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
GABPB1-207ENST00000558335 SPRR2EP22531 72 aa1.51□□□□□ -2.17
GABPB1-207ENST00000558335 SPRR2BP35325 72 aa1.51□□□□□ -2.17
GABPB1-207ENST00000558335 SPRR2AP35326 72 aa1.51□□□□□ -2.17
GABPB1-207ENST00000558335 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
GABPB1-207ENST00000558335 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
GABPB1-207ENST00000558335 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
GABPB1-207ENST00000558335 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
GABPB1-207ENST00000558335 SPRR2DP22532 72 aa1.46□□□□□ -2.18
GABPB1-207ENST00000558335 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
GABPB1-207ENST00000558335 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
GABPB1-207ENST00000558335 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
GABPB1-207ENST00000558335 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
GABPB1-207ENST00000558335 SYNE2Q8WXH0 6885 aaKnown RBP1.33□□□□□ -2.2
GABPB1-207ENST00000558335 LCE1CQ5T751 118 aa1.31□□□□□ -2.2
GABPB1-207ENST00000558335 LCE1BQ5T7P3 118 aa1.31□□□□□ -2.2
GABPB1-207ENST00000558335 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
GABPB1-207ENST00000558335 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
GABPB1-207ENST00000558335 KRTAP20-1Q3LI63 56 aa1.26□□□□□ -2.21
GABPB1-207ENST00000558335 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
GABPB1-207ENST00000558335 NEBP20929 6669 aa1.22□□□□□ -2.21
GABPB1-207ENST00000558335 MT4P47944 62 aa1.2□□□□□ -2.22
GABPB1-207ENST00000558335 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
GABPB1-207ENST00000558335 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
GABPB1-207ENST00000558335 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.23
GABPB1-207ENST00000558335 MUC5ACP98088 5654 aa1.09□□□□□ -2.24
GABPB1-207ENST00000558335 HMCN1Q96RW7 5635 aa1.07□□□□□ -2.24
GABPB1-207ENST00000558335 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
GABPB1-207ENST00000558335 GPR98Q8WXG9 6306 aa1.02□□□□□ -2.25
GABPB1-207ENST00000558335 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
GABPB1-207ENST00000558335 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
GABPB1-207ENST00000558335 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
GABPB1-207ENST00000558335 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
GABPB1-207ENST00000558335 AHNAKQ09666 5890 aaKnown RBP0.78□□□□□ -2.28
GABPB1-207ENST00000558335 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 319.7 ms