RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
RPL28-205ENST00000558131 SMIM26A0A096LP01 95 aa5.53□□□□□ -1.52
RPL28-205ENST00000558131 TNP1P09430 55 aa5.52□□□□□ -1.53
RPL28-205ENST00000558131 A0A1B0GU69 56 aa5.49□□□□□ -1.53
RPL28-205ENST00000558131 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
RPL28-205ENST00000558131 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
RPL28-205ENST00000558131 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
RPL28-205ENST00000558131 CCDC179H3BU77 68 aa5.44□□□□□ -1.54
RPL28-205ENST00000558131 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
RPL28-205ENST00000558131 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
RPL28-205ENST00000558131 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
RPL28-205ENST00000558131 ATP5EP56381 51 aaPredicted RBP5.39□□□□□ -1.55
RPL28-205ENST00000558131 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
RPL28-205ENST00000558131 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
RPL28-205ENST00000558131 TMEM258P61165 79 aa5.28□□□□□ -1.56
RPL28-205ENST00000558131 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
RPL28-205ENST00000558131 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
RPL28-205ENST00000558131 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
RPL28-205ENST00000558131 LINC01558Q9Y6Z2 57 aa5.2□□□□□ -1.58
RPL28-205ENST00000558131 KRTAP25-1Q3LHN0 102 aa5.1□□□□□ -1.59
RPL28-205ENST00000558131 UQCR11O14957 56 aa5.07□□□□□ -1.6
RPL28-205ENST00000558131 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
RPL28-205ENST00000558131 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
RPL28-205ENST00000558131 V9GYY9 64 aa5.02□□□□□ -1.61
RPL28-205ENST00000558131 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
RPL28-205ENST00000558131 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
RPL28-205ENST00000558131 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
RPL28-205ENST00000558131 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
RPL28-205ENST00000558131 Q1T7F1 81 aa4.94□□□□□ -1.62
RPL28-205ENST00000558131 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
RPL28-205ENST00000558131 PSPHP1O15172 72 aa4.93□□□□□ -1.62
RPL28-205ENST00000558131 MT1AP04731 61 aa4.93□□□□□ -1.62
RPL28-205ENST00000558131 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
RPL28-205ENST00000558131 K7ERS5 55 aa4.9□□□□□ -1.63
RPL28-205ENST00000558131 PCP4P48539 62 aa4.9□□□□□ -1.63
RPL28-205ENST00000558131 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
RPL28-205ENST00000558131 OBSCNQ5VST9 7968 aa4.83□□□□□ -1.64
RPL28-205ENST00000558131 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
RPL28-205ENST00000558131 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
RPL28-205ENST00000558131 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
RPL28-205ENST00000558131 A6NED7 52 aa4.8□□□□□ -1.64
RPL28-205ENST00000558131 H3BS24 57 aa4.8□□□□□ -1.64
RPL28-205ENST00000558131 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
RPL28-205ENST00000558131 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
RPL28-205ENST00000558131 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
RPL28-205ENST00000558131 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
RPL28-205ENST00000558131 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
RPL28-205ENST00000558131 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
RPL28-205ENST00000558131 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
RPL28-205ENST00000558131 ROMO1P60602 79 aa4.53□□□□□ -1.68
RPL28-205ENST00000558131 MT3P25713 68 aa4.47□□□□□ -1.69
RPL28-205ENST00000558131 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
RPL28-205ENST00000558131 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
RPL28-205ENST00000558131 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
RPL28-205ENST00000558131 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
RPL28-205ENST00000558131 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
RPL28-205ENST00000558131 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
RPL28-205ENST00000558131 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
RPL28-205ENST00000558131 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
RPL28-205ENST00000558131 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
RPL28-205ENST00000558131 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
RPL28-205ENST00000558131 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
RPL28-205ENST00000558131 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
RPL28-205ENST00000558131 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
RPL28-205ENST00000558131 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
RPL28-205ENST00000558131 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
RPL28-205ENST00000558131 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
RPL28-205ENST00000558131 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
RPL28-205ENST00000558131 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
RPL28-205ENST00000558131 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
RPL28-205ENST00000558131 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
RPL28-205ENST00000558131 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
RPL28-205ENST00000558131 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
RPL28-205ENST00000558131 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
RPL28-205ENST00000558131 PRM1P04553 51 aa2.32□□□□□ -2.04
RPL28-205ENST00000558131 INE1O15225 51 aa2.24□□□□□ -2.05
RPL28-205ENST00000558131 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 124.5 ms