RNA–Protein interactions for RNA: ENST00000557694.1

LGMN-218, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-218ENST00000557694 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
LGMN-218ENST00000557694 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
LGMN-218ENST00000557694 A0A1B0GU69 56 aa5.24□□□□□ -1.57
LGMN-218ENST00000557694 KRTAP5-10Q6L8G5 202 aa5.22□□□□□ -1.57
LGMN-218ENST00000557694 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
LGMN-218ENST00000557694 TNP1P09430 55 aa5.18□□□□□ -1.58
LGMN-218ENST00000557694 CCDC179H3BU77 68 aa5.16□□□□□ -1.58
LGMN-218ENST00000557694 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
LGMN-218ENST00000557694 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
LGMN-218ENST00000557694 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
LGMN-218ENST00000557694 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
LGMN-218ENST00000557694 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
LGMN-218ENST00000557694 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
LGMN-218ENST00000557694 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
LGMN-218ENST00000557694 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
LGMN-218ENST00000557694 PCP4P48539 62 aa4.98□□□□□ -1.61
LGMN-218ENST00000557694 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
LGMN-218ENST00000557694 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
LGMN-218ENST00000557694 PRR15LQ9BU68 103 aa4.9□□□□□ -1.63
LGMN-218ENST00000557694 ATP5EP56381 51 aaPredicted RBP4.84□□□□□ -1.63
LGMN-218ENST00000557694 UQCR11O14957 56 aa4.82□□□□□ -1.64
LGMN-218ENST00000557694 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
LGMN-218ENST00000557694 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
LGMN-218ENST00000557694 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
LGMN-218ENST00000557694 TMEM258P61165 79 aa4.73□□□□□ -1.65
LGMN-218ENST00000557694 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
LGMN-218ENST00000557694 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
LGMN-218ENST00000557694 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
LGMN-218ENST00000557694 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
LGMN-218ENST00000557694 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
LGMN-218ENST00000557694 PSPHP1O15172 72 aa4.66□□□□□ -1.66
LGMN-218ENST00000557694 A0A0A0MQY5 61 aa4.64□□□□□ -1.67
LGMN-218ENST00000557694 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
LGMN-218ENST00000557694 MT1AP04731 61 aa4.63□□□□□ -1.67
LGMN-218ENST00000557694 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
LGMN-218ENST00000557694 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
LGMN-218ENST00000557694 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
LGMN-218ENST00000557694 Q1T7F1 81 aa4.52□□□□□ -1.69
LGMN-218ENST00000557694 K7ERS5 55 aa4.49□□□□□ -1.69
LGMN-218ENST00000557694 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
LGMN-218ENST00000557694 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
LGMN-218ENST00000557694 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
LGMN-218ENST00000557694 A6NED7 52 aa4.38□□□□□ -1.71
LGMN-218ENST00000557694 V9GYY9 64 aa4.38□□□□□ -1.71
LGMN-218ENST00000557694 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
LGMN-218ENST00000557694 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
LGMN-218ENST00000557694 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
LGMN-218ENST00000557694 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
LGMN-218ENST00000557694 ROMO1P60602 79 aa4.34□□□□□ -1.71
LGMN-218ENST00000557694 RPS28P62857 69 aaKnown RBP4.24□□□□□ -1.73
LGMN-218ENST00000557694 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
LGMN-218ENST00000557694 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
LGMN-218ENST00000557694 MT3P25713 68 aa4.16□□□□□ -1.74
LGMN-218ENST00000557694 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
LGMN-218ENST00000557694 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
LGMN-218ENST00000557694 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
LGMN-218ENST00000557694 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
LGMN-218ENST00000557694 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
LGMN-218ENST00000557694 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
LGMN-218ENST00000557694 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
LGMN-218ENST00000557694 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
LGMN-218ENST00000557694 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
LGMN-218ENST00000557694 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
LGMN-218ENST00000557694 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
LGMN-218ENST00000557694 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
LGMN-218ENST00000557694 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
LGMN-218ENST00000557694 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
LGMN-218ENST00000557694 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
LGMN-218ENST00000557694 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
LGMN-218ENST00000557694 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
LGMN-218ENST00000557694 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
LGMN-218ENST00000557694 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
LGMN-218ENST00000557694 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
LGMN-218ENST00000557694 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
LGMN-218ENST00000557694 PRM1P04553 51 aa2.29□□□□□ -2.04
LGMN-218ENST00000557694 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
LGMN-218ENST00000557694 INE1O15225 51 aa2.09□□□□□ -2.07
LGMN-218ENST00000557694 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms