RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MT1GP13640 62 aa5.07□□□□□ -1.6
SLIRP-210ENST00000557431 KRTAP12-1P59990 96 aa5.07□□□□□ -1.6
SLIRP-210ENST00000557431 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
SLIRP-210ENST00000557431 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
SLIRP-210ENST00000557431 MT1MQ8N339 61 aa5.05□□□□□ -1.6
SLIRP-210ENST00000557431 SMIM26A0A096LP01 95 aa5.04□□□□□ -1.6
SLIRP-210ENST00000557431 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
SLIRP-210ENST00000557431 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
SLIRP-210ENST00000557431 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
SLIRP-210ENST00000557431 A8MU10 97 aa5□□□□□ -1.61
SLIRP-210ENST00000557431 PP632Q6XCG6 107 aa5□□□□□ -1.61
SLIRP-210ENST00000557431 PRR15LQ9BU68 103 aa5□□□□□ -1.61
SLIRP-210ENST00000557431 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
SLIRP-210ENST00000557431 MT1LQ93083 61 aa4.99□□□□□ -1.61
SLIRP-210ENST00000557431 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
SLIRP-210ENST00000557431 H3BS24 57 aa4.88□□□□□ -1.63
SLIRP-210ENST00000557431 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
SLIRP-210ENST00000557431 UQCR11O14957 56 aa4.86□□□□□ -1.63
SLIRP-210ENST00000557431 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
SLIRP-210ENST00000557431 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
SLIRP-210ENST00000557431 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
SLIRP-210ENST00000557431 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
SLIRP-210ENST00000557431 TNP1P09430 55 aa4.8□□□□□ -1.64
SLIRP-210ENST00000557431 Q1T7F1 81 aa4.8□□□□□ -1.64
SLIRP-210ENST00000557431 V9GYY9 64 aa4.8□□□□□ -1.64
SLIRP-210ENST00000557431 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
SLIRP-210ENST00000557431 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
SLIRP-210ENST00000557431 PSPHP1O15172 72 aa4.71□□□□□ -1.66
SLIRP-210ENST00000557431 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SLIRP-210ENST00000557431 BRK1Q8WUW1 75 aa4.7□□□□□ -1.66
SLIRP-210ENST00000557431 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
SLIRP-210ENST00000557431 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
SLIRP-210ENST00000557431 K7ERS5 55 aa4.63□□□□□ -1.67
SLIRP-210ENST00000557431 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
SLIRP-210ENST00000557431 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
SLIRP-210ENST00000557431 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
SLIRP-210ENST00000557431 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
SLIRP-210ENST00000557431 A6NED7 52 aa4.55□□□□□ -1.68
SLIRP-210ENST00000557431 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
SLIRP-210ENST00000557431 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
SLIRP-210ENST00000557431 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
SLIRP-210ENST00000557431 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
SLIRP-210ENST00000557431 ROMO1P60602 79 aa4.35□□□□□ -1.71
SLIRP-210ENST00000557431 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
SLIRP-210ENST00000557431 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SLIRP-210ENST00000557431 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
SLIRP-210ENST00000557431 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
SLIRP-210ENST00000557431 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
SLIRP-210ENST00000557431 MT1AP04731 61 aa4.22□□□□□ -1.73
SLIRP-210ENST00000557431 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
SLIRP-210ENST00000557431 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
SLIRP-210ENST00000557431 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
SLIRP-210ENST00000557431 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
SLIRP-210ENST00000557431 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SLIRP-210ENST00000557431 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
SLIRP-210ENST00000557431 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SLIRP-210ENST00000557431 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
SLIRP-210ENST00000557431 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
SLIRP-210ENST00000557431 MT3P25713 68 aa3.84□□□□□ -1.79
SLIRP-210ENST00000557431 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
SLIRP-210ENST00000557431 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
SLIRP-210ENST00000557431 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
SLIRP-210ENST00000557431 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SLIRP-210ENST00000557431 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
SLIRP-210ENST00000557431 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
SLIRP-210ENST00000557431 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
SLIRP-210ENST00000557431 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
SLIRP-210ENST00000557431 INE1O15225 51 aa3.04□□□□□ -1.92
SLIRP-210ENST00000557431 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SLIRP-210ENST00000557431 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SLIRP-210ENST00000557431 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SLIRP-210ENST00000557431 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
SLIRP-210ENST00000557431 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
SLIRP-210ENST00000557431 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
SLIRP-210ENST00000557431 PRM1P04553 51 aa2.22□□□□□ -2.05
SLIRP-210ENST00000557431 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SLIRP-210ENST00000557431 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 78.6 ms