RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	SMIM20	Q8N5G0	67 aa		4.02	□□□□□ -1.77
HNRNPC-231	ENST00000557336		A0A0D9SG42	100 aa		4.01	□□□□□ -1.77
HNRNPC-231	ENST00000557336	MT1M	Q8N339	61 aa		4	□□□□□ -1.77
HNRNPC-231	ENST00000557336	SPANXA2-OT1	Q8N9U9	137 aa		4	□□□□□ -1.77
HNRNPC-231	ENST00000557336	MT4	P47944	62 aa		3.99	□□□□□ -1.77
HNRNPC-231	ENST00000557336	MT1L	Q93083	61 aa		3.97	□□□□□ -1.77
HNRNPC-231	ENST00000557336	SPATA8	Q6RVD6	105 aa		3.95	□□□□□ -1.78
HNRNPC-231	ENST00000557336	KRTAP4-3	Q9BYR4	195 aa		3.95	□□□□□ -1.78
HNRNPC-231	ENST00000557336	KRTAP12-1	P59990	96 aa		3.94	□□□□□ -1.78
HNRNPC-231	ENST00000557336	KRTAP5-4	Q6L8H1	288 aa		3.94	□□□□□ -1.78
HNRNPC-231	ENST00000557336	KRTAP5-1	Q6L8H4	278 aa		3.94	□□□□□ -1.78
HNRNPC-231	ENST00000557336	PP632	Q6XCG6	107 aa		3.94	□□□□□ -1.78
HNRNPC-231	ENST00000557336	KRTAP5-10	Q6L8G5	202 aa		3.91	□□□□□ -1.78
HNRNPC-231	ENST00000557336	SPINT4	Q6UDR6	99 aa		3.9	□□□□□ -1.79
HNRNPC-231	ENST00000557336	COA5	Q86WW8	74 aa		3.9	□□□□□ -1.79
HNRNPC-231	ENST00000557336	LCE3E	Q5T5B0	92 aa		3.89	□□□□□ -1.79
HNRNPC-231	ENST00000557336		A0A1B0GU33	70 aa		3.86	□□□□□ -1.79
HNRNPC-231	ENST00000557336	SERP2	Q8N6R1	65 aa		3.86	□□□□□ -1.79
HNRNPC-231	ENST00000557336	LCE3A	Q5TA76	89 aa		3.85	□□□□□ -1.79
HNRNPC-231	ENST00000557336		K7ERU9	68 aa		3.84	□□□□□ -1.79
HNRNPC-231	ENST00000557336	C10orf95	Q9H7T3	257 aa		3.84	□□□□□ -1.79
HNRNPC-231	ENST00000557336	SERP1	Q9Y6X1	66 aa		3.84	□□□□□ -1.79
HNRNPC-231	ENST00000557336	SEC61G	P60059	68 aa		3.82	□□□□□ -1.8
HNRNPC-231	ENST00000557336		A8MU10	97 aa		3.78	□□□□□ -1.8
HNRNPC-231	ENST00000557336	KRTAP5-7	Q6L8G8	165 aa		3.76	□□□□□ -1.81
HNRNPC-231	ENST00000557336	KRTAP4-4	Q9BYR3	166 aa		3.76	□□□□□ -1.81
HNRNPC-231	ENST00000557336		H7BZZ5	65 aa		3.72	□□□□□ -1.81
HNRNPC-231	ENST00000557336	TNP1	P09430	55 aa		3.72	□□□□□ -1.81
HNRNPC-231	ENST00000557336	SMIM26	A0A096LP01	95 aa		3.71	□□□□□ -1.82
HNRNPC-231	ENST00000557336	KRTAP20-2	Q3LI61	65 aa		3.71	□□□□□ -1.82
HNRNPC-231	ENST00000557336	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.71	□□□□□ -1.82
HNRNPC-231	ENST00000557336	COX7C	P15954	63 aa		3.68	□□□□□ -1.82
HNRNPC-231	ENST00000557336	KRTAP12-3	P60328	96 aa		3.68	□□□□□ -1.82
HNRNPC-231	ENST00000557336		A0A1B0GU69	56 aa		3.67	□□□□□ -1.82
HNRNPC-231	ENST00000557336	SYNE1	Q8NF91	8797 aa	Known RBP	3.66	□□□□□ -1.82
HNRNPC-231	ENST00000557336	SPRR5	A0A1B0GTR4	108 aa		3.65	□□□□□ -1.83
HNRNPC-231	ENST00000557336	KRTAP12-4	P60329	112 aa		3.57	□□□□□ -1.84
HNRNPC-231	ENST00000557336	LINC01558	Q9Y6Z2	57 aa		3.46	□□□□□ -1.86
HNRNPC-231	ENST00000557336	PRR15L	Q9BU68	103 aa		3.45	□□□□□ -1.86
HNRNPC-231	ENST00000557336	OBSCN	Q5VST9	7968 aa		3.43	□□□□□ -1.86
HNRNPC-231	ENST00000557336	KRTAP25-1	Q3LHN0	102 aa		3.43	□□□□□ -1.86
HNRNPC-231	ENST00000557336	KRTAP5-2	Q701N4	177 aa		3.43	□□□□□ -1.86
HNRNPC-231	ENST00000557336	AHNAK	Q09666	5890 aa	Known RBP	3.41	□□□□□ -1.86
HNRNPC-231	ENST00000557336	CCDC179	H3BU77	68 aa		3.41	□□□□□ -1.86
HNRNPC-231	ENST00000557336	ANAPC13	Q9BS18	74 aa		3.4	□□□□□ -1.87
HNRNPC-231	ENST00000557336	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.38	□□□□□ -1.87
HNRNPC-231	ENST00000557336	UQCR11	O14957	56 aa		3.38	□□□□□ -1.87
HNRNPC-231	ENST00000557336	KRTAP6-1	Q3LI64	71 aa		3.37	□□□□□ -1.87
HNRNPC-231	ENST00000557336	MUC5AC	P98088	5654 aa		3.37	□□□□□ -1.87
HNRNPC-231	ENST00000557336	KRTAP5-8	O75690	187 aa		3.35	□□□□□ -1.87
HNRNPC-231	ENST00000557336	MT1A	P04731	61 aa		3.35	□□□□□ -1.87
HNRNPC-231	ENST00000557336	ATP5E	P56381	51 aa	Predicted RBP	3.34	□□□□□ -1.87
HNRNPC-231	ENST00000557336	MIR22HG	Q0VDD5	57 aa		3.29	□□□□□ -1.88
HNRNPC-231	ENST00000557336	KRTAP6-2	Q3LI66	62 aa		3.25	□□□□□ -1.89
HNRNPC-231	ENST00000557336	TMEM258	P61165	79 aa		3.2	□□□□□ -1.9
HNRNPC-231	ENST00000557336		K7ERS5	55 aa		3.18	□□□□□ -1.9
HNRNPC-231	ENST00000557336	LCE3D	Q9BYE3	92 aa		3.15	□□□□□ -1.91
HNRNPC-231	ENST00000557336	PSPHP1	O15172	72 aa		3.13	□□□□□ -1.91
HNRNPC-231	ENST00000557336		Q1T7F1	81 aa		3.09	□□□□□ -1.91
HNRNPC-231	ENST00000557336	CDC42SE1	Q9NRR8	79 aa		3.03	□□□□□ -1.92
HNRNPC-231	ENST00000557336		V9GYY9	64 aa		3.03	□□□□□ -1.92
HNRNPC-231	ENST00000557336	ROMO1	P60602	79 aa		3.01	□□□□□ -1.93
HNRNPC-231	ENST00000557336	RPS28	P62857	69 aa	Known RBP	3.01	□□□□□ -1.93
HNRNPC-231	ENST00000557336	LCE1C	Q5T751	118 aa		2.99	□□□□□ -1.93
HNRNPC-231	ENST00000557336	LCE1B	Q5T7P3	118 aa		2.99	□□□□□ -1.93
HNRNPC-231	ENST00000557336		A6NED7	52 aa		2.97	□□□□□ -1.93
HNRNPC-231	ENST00000557336	MUC19	Q7Z5P9	8384 aa		2.43	□□□□□ -2.02
HNRNPC-231	ENST00000557336	PRO0628	Q9UI54	55 aa		2.3	□□□□□ -2.04
HNRNPC-231	ENST00000557336	BRK1	Q8WUW1	75 aa		2.28	□□□□□ -2.04
HNRNPC-231	ENST00000557336	KRTAP21-2	Q3LI59	83 aa		2.25	□□□□□ -2.05
HNRNPC-231	ENST00000557336	PHGR1	C9JFL3	82 aa		2.24	□□□□□ -2.05
HNRNPC-231	ENST00000557336	LUZP6	Q538Z0	58 aa		2.23	□□□□□ -2.05
HNRNPC-231	ENST00000557336	PMAIP1	Q13794	54 aa		2.13	□□□□□ -2.07
HNRNPC-231	ENST00000557336	KTN1-AS1	Q86SY8	53 aa		1.97	□□□□□ -2.09
HNRNPC-231	ENST00000557336	KRTAP21-1	Q3LI58	79 aa		1.69	□□□□□ -2.14
HNRNPC-231	ENST00000557336	PRM1	P04553	51 aa		1.54	□□□□□ -2.16
HNRNPC-231	ENST00000557336	MUC16	Q8WXI7	14507 aa		1.38	□□□□□ -2.19
HNRNPC-231	ENST00000557336	INE1	O15225	51 aa		1.36	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 42.4 ms