RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
NEK9-210ENST00000557026 MT1AP04731 61 aa3.67□□□□□ -1.82
NEK9-210ENST00000557026 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
NEK9-210ENST00000557026 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
NEK9-210ENST00000557026 MT4P47944 62 aa3.64□□□□□ -1.83
NEK9-210ENST00000557026 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
NEK9-210ENST00000557026 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
NEK9-210ENST00000557026 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
NEK9-210ENST00000557026 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
NEK9-210ENST00000557026 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
NEK9-210ENST00000557026 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
NEK9-210ENST00000557026 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
NEK9-210ENST00000557026 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
NEK9-210ENST00000557026 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
NEK9-210ENST00000557026 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
NEK9-210ENST00000557026 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
NEK9-210ENST00000557026 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
NEK9-210ENST00000557026 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
NEK9-210ENST00000557026 PRM1P04553 51 aa3.37□□□□□ -1.87
NEK9-210ENST00000557026 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
NEK9-210ENST00000557026 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
NEK9-210ENST00000557026 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
NEK9-210ENST00000557026 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
NEK9-210ENST00000557026 TNXBP22105 4242 aa3.28□□□□□ -1.88
NEK9-210ENST00000557026 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
NEK9-210ENST00000557026 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
NEK9-210ENST00000557026 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
NEK9-210ENST00000557026 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
NEK9-210ENST00000557026 MUC2Q02817 5179 aa3.16□□□□□ -1.9
NEK9-210ENST00000557026 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
NEK9-210ENST00000557026 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
NEK9-210ENST00000557026 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
NEK9-210ENST00000557026 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
NEK9-210ENST00000557026 LPAP08519 4548 aa3.08□□□□□ -1.92
NEK9-210ENST00000557026 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
NEK9-210ENST00000557026 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
NEK9-210ENST00000557026 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
NEK9-210ENST00000557026 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
NEK9-210ENST00000557026 KRTAP4-9Q9BYQ8 210 aa3.02□□□□□ -1.93
NEK9-210ENST00000557026 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
NEK9-210ENST00000557026 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
NEK9-210ENST00000557026 NEBP20929 6669 aa2.89□□□□□ -1.95
NEK9-210ENST00000557026 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
NEK9-210ENST00000557026 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
NEK9-210ENST00000557026 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
NEK9-210ENST00000557026 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
NEK9-210ENST00000557026 SSPOA2VEC9 5147 aa2.71□□□□□ -1.98
NEK9-210ENST00000557026 USH2AO75445 5202 aa2.66□□□□□ -1.98
NEK9-210ENST00000557026 KMT2DO14686 5537 aa2.66□□□□□ -1.98
NEK9-210ENST00000557026 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
NEK9-210ENST00000557026 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
NEK9-210ENST00000557026 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
NEK9-210ENST00000557026 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2
NEK9-210ENST00000557026 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
NEK9-210ENST00000557026 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
NEK9-210ENST00000557026 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
NEK9-210ENST00000557026 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.02
NEK9-210ENST00000557026 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
NEK9-210ENST00000557026 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
NEK9-210ENST00000557026 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
NEK9-210ENST00000557026 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
NEK9-210ENST00000557026 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
NEK9-210ENST00000557026 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
NEK9-210ENST00000557026 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
NEK9-210ENST00000557026 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
NEK9-210ENST00000557026 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
NEK9-210ENST00000557026 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
NEK9-210ENST00000557026 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
NEK9-210ENST00000557026 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
NEK9-210ENST00000557026 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
NEK9-210ENST00000557026 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
NEK9-210ENST00000557026 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
NEK9-210ENST00000557026 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
NEK9-210ENST00000557026 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
NEK9-210ENST00000557026 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
NEK9-210ENST00000557026 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
NEK9-210ENST00000557026 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
NEK9-210ENST00000557026 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 139.3 ms