RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 UQCR11O14957 56 aa8.14□□□□□ -1.11
PABPN1-207ENST00000556821 MT1GP13640 62 aa8.13□□□□□ -1.11
PABPN1-207ENST00000556821 MT1LQ93083 61 aa8.08□□□□□ -1.12
PABPN1-207ENST00000556821 MT4P47944 62 aa8.07□□□□□ -1.12
PABPN1-207ENST00000556821 LCE4AQ5TA78 99 aa8.07□□□□□ -1.12
PABPN1-207ENST00000556821 KRTAP5-7Q6L8G8 165 aa8.07□□□□□ -1.12
PABPN1-207ENST00000556821 MT1MQ8N339 61 aa8.03□□□□□ -1.12
PABPN1-207ENST00000556821 PP632Q6XCG6 107 aa8.02□□□□□ -1.13
PABPN1-207ENST00000556821 MIR22HGQ0VDD5 57 aa7.97□□□□□ -1.13
PABPN1-207ENST00000556821 PSPHP1O15172 72 aa7.89□□□□□ -1.15
PABPN1-207ENST00000556821 Q1T7F1 81 aa7.87□□□□□ -1.15
PABPN1-207ENST00000556821 V9GYY9 64 aa7.87□□□□□ -1.15
PABPN1-207ENST00000556821 KRTAP4-3Q9BYR4 195 aa7.86□□□□□ -1.15
PABPN1-207ENST00000556821 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
PABPN1-207ENST00000556821 KRTAP5-4Q6L8H1 288 aa7.84□□□□□ -1.15
PABPN1-207ENST00000556821 KRTAP5-3Q6L8H2 238 aa7.83□□□□□ -1.16
PABPN1-207ENST00000556821 KRTAP4-6Q9BYQ5 205 aa7.83□□□□□ -1.16
PABPN1-207ENST00000556821 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
PABPN1-207ENST00000556821 K7ERS5 55 aa7.74□□□□□ -1.17
PABPN1-207ENST00000556821 KRTAP4-7Q9BYR0 210 aa7.71□□□□□ -1.18
PABPN1-207ENST00000556821 SPRR5A0A1B0GTR4 108 aa7.64□□□□□ -1.19
PABPN1-207ENST00000556821 A6NED7 52 aa7.6□□□□□ -1.19
PABPN1-207ENST00000556821 SVIPQ8NHG7 77 aa7.6□□□□□ -1.19
PABPN1-207ENST00000556821 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
PABPN1-207ENST00000556821 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
PABPN1-207ENST00000556821 KRTAP20-2Q3LI61 65 aa7.41□□□□□ -1.22
PABPN1-207ENST00000556821 CDC42SE1Q9NRR8 79 aa7.39□□□□□ -1.23
PABPN1-207ENST00000556821 KRTAP5-5Q701N2 237 aaPredicted RBP7.38□□□□□ -1.23
PABPN1-207ENST00000556821 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
PABPN1-207ENST00000556821 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
PABPN1-207ENST00000556821 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
PABPN1-207ENST00000556821 ROMO1P60602 79 aa7.29□□□□□ -1.24
PABPN1-207ENST00000556821 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
PABPN1-207ENST00000556821 AHNAKQ09666 5890 aaKnown RBP7.09□□□□□ -1.27
PABPN1-207ENST00000556821 KRTAP12-4P60329 112 aa7.06□□□□□ -1.28
PABPN1-207ENST00000556821 SYNE1Q8NF91 8797 aaKnown RBP7.02□□□□□ -1.29
PABPN1-207ENST00000556821 MUC5ACP98088 5654 aa7.01□□□□□ -1.29
PABPN1-207ENST00000556821 KRTAP4-11Q9BYQ6 195 aa7□□□□□ -1.29
PABPN1-207ENST00000556821 MUC5BQ9HC84 5762 aaPredicted RBP6.96□□□□□ -1.29
PABPN1-207ENST00000556821 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
PABPN1-207ENST00000556821 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
PABPN1-207ENST00000556821 MT1AP04731 61 aa6.88□□□□□ -1.31
PABPN1-207ENST00000556821 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
PABPN1-207ENST00000556821 KRTAP5-8O75690 187 aa6.82□□□□□ -1.32
PABPN1-207ENST00000556821 KRTAP5-2Q701N4 177 aa6.71□□□□□ -1.34
PABPN1-207ENST00000556821 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
PABPN1-207ENST00000556821 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
PABPN1-207ENST00000556821 KRTAP9-9Q9BYP9 154 aa6.54□□□□□ -1.36
PABPN1-207ENST00000556821 KRTAP6-2Q3LI66 62 aa6.5□□□□□ -1.37
PABPN1-207ENST00000556821 OBSCNQ5VST9 7968 aa6.45□□□□□ -1.38
PABPN1-207ENST00000556821 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
PABPN1-207ENST00000556821 H3BS24 57 aa6.35□□□□□ -1.39
PABPN1-207ENST00000556821 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
PABPN1-207ENST00000556821 MT3P25713 68 aa6.24□□□□□ -1.41
PABPN1-207ENST00000556821 KRTAP5-1Q6L8H4 278 aa6.19□□□□□ -1.42
PABPN1-207ENST00000556821 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
PABPN1-207ENST00000556821 LCE1EQ5T753 118 aa5.72□□□□□ -1.49
PABPN1-207ENST00000556821 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
PABPN1-207ENST00000556821 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
PABPN1-207ENST00000556821 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
PABPN1-207ENST00000556821 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
PABPN1-207ENST00000556821 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
PABPN1-207ENST00000556821 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
PABPN1-207ENST00000556821 LUZP6Q538Z0 58 aa4.96□□□□□ -1.62
PABPN1-207ENST00000556821 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
PABPN1-207ENST00000556821 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
PABPN1-207ENST00000556821 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
PABPN1-207ENST00000556821 A0A0A0MQY5 61 aa4.85□□□□□ -1.63
PABPN1-207ENST00000556821 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
PABPN1-207ENST00000556821 PHGR1C9JFL3 82 aa4.78□□□□□ -1.64
PABPN1-207ENST00000556821 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
PABPN1-207ENST00000556821 INE1O15225 51 aa4.21□□□□□ -1.74
PABPN1-207ENST00000556821 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
PABPN1-207ENST00000556821 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
PABPN1-207ENST00000556821 PRM1P04553 51 aa3.75□□□□□ -1.81
PABPN1-207ENST00000556821 KRTAP21-1Q3LI58 79 aa3.67□□□□□ -1.82
PABPN1-207ENST00000556821 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 77 of 20,778 RNA–protein pairs in 119.5 ms