RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
MARK3-211ENST00000556744 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
MARK3-211ENST00000556744 A0A1B0GU33 70 aa3.69□□□□□ -1.82
MARK3-211ENST00000556744 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
MARK3-211ENST00000556744 SPATA8Q6RVD6 105 aa3.66□□□□□ -1.82
MARK3-211ENST00000556744 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
MARK3-211ENST00000556744 A0A0D9SG42 100 aa3.63□□□□□ -1.83
MARK3-211ENST00000556744 A0A1B0GU69 56 aa3.62□□□□□ -1.83
MARK3-211ENST00000556744 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
MARK3-211ENST00000556744 SPRR2DP22532 72 aa3.59□□□□□ -1.83
MARK3-211ENST00000556744 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
MARK3-211ENST00000556744 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
MARK3-211ENST00000556744 SPINT4Q6UDR6 99 aa3.58□□□□□ -1.84
MARK3-211ENST00000556744 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
MARK3-211ENST00000556744 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
MARK3-211ENST00000556744 PRR15LQ9BU68 103 aa3.54□□□□□ -1.84
MARK3-211ENST00000556744 MT1EP04732 61 aa3.53□□□□□ -1.84
MARK3-211ENST00000556744 Q1T7F1 81 aa3.53□□□□□ -1.84
MARK3-211ENST00000556744 PSPHP1O15172 72 aa3.51□□□□□ -1.85
MARK3-211ENST00000556744 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
MARK3-211ENST00000556744 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
MARK3-211ENST00000556744 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
MARK3-211ENST00000556744 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
MARK3-211ENST00000556744 V9GYY9 64 aa3.46□□□□□ -1.86
MARK3-211ENST00000556744 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
MARK3-211ENST00000556744 UQCR11O14957 56 aa3.44□□□□□ -1.86
MARK3-211ENST00000556744 MT1GP13640 62 aa3.43□□□□□ -1.86
MARK3-211ENST00000556744 TNP1P09430 55 aa3.42□□□□□ -1.86
MARK3-211ENST00000556744 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
MARK3-211ENST00000556744 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
MARK3-211ENST00000556744 MT1LQ93083 61 aa3.38□□□□□ -1.87
MARK3-211ENST00000556744 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
MARK3-211ENST00000556744 A6NED7 52 aa3.35□□□□□ -1.87
MARK3-211ENST00000556744 MT1MQ8N339 61 aa3.35□□□□□ -1.87
MARK3-211ENST00000556744 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
MARK3-211ENST00000556744 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
MARK3-211ENST00000556744 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
MARK3-211ENST00000556744 KRTAP25-1Q3LHN0 102 aa3.28□□□□□ -1.88
MARK3-211ENST00000556744 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
MARK3-211ENST00000556744 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
MARK3-211ENST00000556744 K7ERS5 55 aa3.24□□□□□ -1.89
MARK3-211ENST00000556744 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
MARK3-211ENST00000556744 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
MARK3-211ENST00000556744 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
MARK3-211ENST00000556744 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
MARK3-211ENST00000556744 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
MARK3-211ENST00000556744 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
MARK3-211ENST00000556744 MT4P47944 62 aa3.12□□□□□ -1.91
MARK3-211ENST00000556744 ROMO1P60602 79 aa3.12□□□□□ -1.91
MARK3-211ENST00000556744 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
MARK3-211ENST00000556744 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
MARK3-211ENST00000556744 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
MARK3-211ENST00000556744 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
MARK3-211ENST00000556744 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
MARK3-211ENST00000556744 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
MARK3-211ENST00000556744 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
MARK3-211ENST00000556744 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
MARK3-211ENST00000556744 MT1AP04731 61 aa2.88□□□□□ -1.95
MARK3-211ENST00000556744 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
MARK3-211ENST00000556744 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
MARK3-211ENST00000556744 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
MARK3-211ENST00000556744 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
MARK3-211ENST00000556744 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
MARK3-211ENST00000556744 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
MARK3-211ENST00000556744 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
MARK3-211ENST00000556744 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
MARK3-211ENST00000556744 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
MARK3-211ENST00000556744 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
MARK3-211ENST00000556744 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
MARK3-211ENST00000556744 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2.01
MARK3-211ENST00000556744 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
MARK3-211ENST00000556744 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
MARK3-211ENST00000556744 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
MARK3-211ENST00000556744 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
MARK3-211ENST00000556744 INE1O15225 51 aa1.67□□□□□ -2.14
MARK3-211ENST00000556744 PRM1P04553 51 aa1.64□□□□□ -2.15
MARK3-211ENST00000556744 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
MARK3-211ENST00000556744 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 298.5 ms