RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 LINC01554Q52M75 96 aa1.99□□□□□ -2.09
ATXN3-242ENST00000556644 MT1BP07438 61 aa1.98□□□□□ -2.09
ATXN3-242ENST00000556644 H1FX-AS1Q4G0G2 97 aa1.98□□□□□ -2.09
ATXN3-242ENST00000556644 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
ATXN3-242ENST00000556644 H0YAA0 97 aa1.95□□□□□ -2.1
ATXN3-242ENST00000556644 KRTAP3-1Q9BYR8 98 aa1.95□□□□□ -2.1
ATXN3-242ENST00000556644 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
ATXN3-242ENST00000556644 PRAC1Q96KF2 57 aa1.94□□□□□ -2.1
ATXN3-242ENST00000556644 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
ATXN3-242ENST00000556644 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
ATXN3-242ENST00000556644 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
ATXN3-242ENST00000556644 MT4P47944 62 aa1.91□□□□□ -2.1
ATXN3-242ENST00000556644 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATXN3-242ENST00000556644 S4R3F8 94 aa1.9□□□□□ -2.11
ATXN3-242ENST00000556644 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
ATXN3-242ENST00000556644 M0QZ58 72 aa1.87□□□□□ -2.11
ATXN3-242ENST00000556644 KRTAP19-8Q3LI54 63 aa1.86□□□□□ -2.11
ATXN3-242ENST00000556644 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
ATXN3-242ENST00000556644 CRIPTQ9P021 101 aa1.84□□□□□ -2.11
ATXN3-242ENST00000556644 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
ATXN3-242ENST00000556644 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
ATXN3-242ENST00000556644 H3BS24 57 aa1.8□□□□□ -2.12
ATXN3-242ENST00000556644 P0C880 135 aa1.8□□□□□ -2.12
ATXN3-242ENST00000556644 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
ATXN3-242ENST00000556644 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
ATXN3-242ENST00000556644 A0A0D9SG42 100 aa1.79□□□□□ -2.12
ATXN3-242ENST00000556644 SPRR2GQ9BYE4 73 aa1.79□□□□□ -2.12
ATXN3-242ENST00000556644 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
ATXN3-242ENST00000556644 KRTAP12-2P59991 146 aa1.78□□□□□ -2.12
ATXN3-242ENST00000556644 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
ATXN3-242ENST00000556644 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
ATXN3-242ENST00000556644 KRTAP15-1Q3LI76 137 aa1.76□□□□□ -2.13
ATXN3-242ENST00000556644 PP632Q6XCG6 107 aa1.76□□□□□ -2.13
ATXN3-242ENST00000556644 R4GN34 69 aa1.76□□□□□ -2.13
ATXN3-242ENST00000556644 MT1XP80297 61 aa1.75□□□□□ -2.13
ATXN3-242ENST00000556644 KRTAP23-1A1A580 65 aa1.73□□□□□ -2.13
ATXN3-242ENST00000556644 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
ATXN3-242ENST00000556644 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
ATXN3-242ENST00000556644 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
ATXN3-242ENST00000556644 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
ATXN3-242ENST00000556644 NDUFAF8A1L188 74 aa1.67□□□□□ -2.14
ATXN3-242ENST00000556644 CAMK2N1Q7Z7J9 78 aa1.66□□□□□ -2.14
ATXN3-242ENST00000556644 TNP1P09430 55 aa1.65□□□□□ -2.15
ATXN3-242ENST00000556644 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
ATXN3-242ENST00000556644 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
ATXN3-242ENST00000556644 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
ATXN3-242ENST00000556644 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
ATXN3-242ENST00000556644 KRTAP10-12P60413 245 aa1.62□□□□□ -2.15
ATXN3-242ENST00000556644 A0A0A0MQY5 61 aa1.6□□□□□ -2.15
ATXN3-242ENST00000556644 MT1EP04732 61 aa1.57□□□□□ -2.16
ATXN3-242ENST00000556644 KRTAP19-7Q3SYF9 63 aa1.56□□□□□ -2.16
ATXN3-242ENST00000556644 KRTAP9-6A8MVA2 160 aa1.53□□□□□ -2.16
ATXN3-242ENST00000556644 MT1MQ8N339 61 aa1.53□□□□□ -2.16
ATXN3-242ENST00000556644 SYNE1Q8NF91 8797 aaKnown RBP1.52□□□□□ -2.17
ATXN3-242ENST00000556644 MT1GP13640 62 aa1.51□□□□□ -2.17
ATXN3-242ENST00000556644 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-242ENST00000556644 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
ATXN3-242ENST00000556644 LCE3AQ5TA76 89 aa1.47□□□□□ -2.17
ATXN3-242ENST00000556644 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
ATXN3-242ENST00000556644 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
ATXN3-242ENST00000556644 MT1LQ93083 61 aa1.43□□□□□ -2.18
ATXN3-242ENST00000556644 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
ATXN3-242ENST00000556644 LCE3CQ5T5A8 94 aa1.37□□□□□ -2.19
ATXN3-242ENST00000556644 MT3P25713 68 aa1.34□□□□□ -2.19
ATXN3-242ENST00000556644 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
ATXN3-242ENST00000556644 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
ATXN3-242ENST00000556644 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
ATXN3-242ENST00000556644 MT1AP04731 61 aa1.19□□□□□ -2.22
ATXN3-242ENST00000556644 LCE1CQ5T751 118 aa1.16□□□□□ -2.22
ATXN3-242ENST00000556644 LCE1BQ5T7P3 118 aa1.16□□□□□ -2.22
ATXN3-242ENST00000556644 LCE1FQ5T754 118 aa1.07□□□□□ -2.24
ATXN3-242ENST00000556644 LCE3DQ9BYE3 92 aa1.07□□□□□ -2.24
ATXN3-242ENST00000556644 LCE3EQ5T5B0 92 aa1.06□□□□□ -2.24
ATXN3-242ENST00000556644 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
ATXN3-242ENST00000556644 PRM1P04553 51 aa0.97□□□□□ -2.25
ATXN3-242ENST00000556644 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
ATXN3-242ENST00000556644 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
ATXN3-242ENST00000556644 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 104 ms