RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PCP4P48539 62 aa5.44□□□□□ -1.54
ACTN1-217ENST00000556203 MT1LQ93083 61 aa5.42□□□□□ -1.54
ACTN1-217ENST00000556203 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
ACTN1-217ENST00000556203 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
ACTN1-217ENST00000556203 A6NED7 52 aa5.38□□□□□ -1.55
ACTN1-217ENST00000556203 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
ACTN1-217ENST00000556203 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
ACTN1-217ENST00000556203 MT1MQ8N339 61 aa5.36□□□□□ -1.55
ACTN1-217ENST00000556203 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
ACTN1-217ENST00000556203 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
ACTN1-217ENST00000556203 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
ACTN1-217ENST00000556203 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
ACTN1-217ENST00000556203 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
ACTN1-217ENST00000556203 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
ACTN1-217ENST00000556203 ROMO1P60602 79 aa5.11□□□□□ -1.59
ACTN1-217ENST00000556203 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
ACTN1-217ENST00000556203 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
ACTN1-217ENST00000556203 MT4P47944 62 aa5.04□□□□□ -1.6
ACTN1-217ENST00000556203 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
ACTN1-217ENST00000556203 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
ACTN1-217ENST00000556203 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
ACTN1-217ENST00000556203 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
ACTN1-217ENST00000556203 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
ACTN1-217ENST00000556203 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
ACTN1-217ENST00000556203 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
ACTN1-217ENST00000556203 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
ACTN1-217ENST00000556203 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
ACTN1-217ENST00000556203 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
ACTN1-217ENST00000556203 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
ACTN1-217ENST00000556203 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
ACTN1-217ENST00000556203 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
ACTN1-217ENST00000556203 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
ACTN1-217ENST00000556203 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
ACTN1-217ENST00000556203 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
ACTN1-217ENST00000556203 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
ACTN1-217ENST00000556203 MT1AP04731 61 aa4.61□□□□□ -1.67
ACTN1-217ENST00000556203 KRTAP5-3Q6L8H2 238 aa4.59□□□□□ -1.67
ACTN1-217ENST00000556203 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
ACTN1-217ENST00000556203 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
ACTN1-217ENST00000556203 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
ACTN1-217ENST00000556203 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
ACTN1-217ENST00000556203 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
ACTN1-217ENST00000556203 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
ACTN1-217ENST00000556203 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
ACTN1-217ENST00000556203 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
ACTN1-217ENST00000556203 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
ACTN1-217ENST00000556203 MT3P25713 68 aa4.21□□□□□ -1.74
ACTN1-217ENST00000556203 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
ACTN1-217ENST00000556203 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
ACTN1-217ENST00000556203 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
ACTN1-217ENST00000556203 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
ACTN1-217ENST00000556203 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
ACTN1-217ENST00000556203 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
ACTN1-217ENST00000556203 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
ACTN1-217ENST00000556203 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
ACTN1-217ENST00000556203 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
ACTN1-217ENST00000556203 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
ACTN1-217ENST00000556203 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
ACTN1-217ENST00000556203 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
ACTN1-217ENST00000556203 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
ACTN1-217ENST00000556203 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
ACTN1-217ENST00000556203 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
ACTN1-217ENST00000556203 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
ACTN1-217ENST00000556203 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
ACTN1-217ENST00000556203 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
ACTN1-217ENST00000556203 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
ACTN1-217ENST00000556203 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
ACTN1-217ENST00000556203 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
ACTN1-217ENST00000556203 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
ACTN1-217ENST00000556203 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
ACTN1-217ENST00000556203 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
ACTN1-217ENST00000556203 H3BS24 57 aa2.68□□□□□ -1.98
ACTN1-217ENST00000556203 PRM1P04553 51 aa2.63□□□□□ -1.99
ACTN1-217ENST00000556203 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
ACTN1-217ENST00000556203 INE1O15225 51 aa2.39□□□□□ -2.03
ACTN1-217ENST00000556203 A0A0A0MQY5 61 aa2.38□□□□□ -2.03
ACTN1-217ENST00000556203 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
ACTN1-217ENST00000556203 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms