RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
CDKN3-209ENST00000556102 C10orf95Q9H7T3 257 aa6.55□□□□□ -1.36
CDKN3-209ENST00000556102 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
CDKN3-209ENST00000556102 TNP1P09430 55 aa6.49□□□□□ -1.37
CDKN3-209ENST00000556102 COX7CP15954 63 aa6.49□□□□□ -1.37
CDKN3-209ENST00000556102 A0A1B0GU69 56 aa6.48□□□□□ -1.37
CDKN3-209ENST00000556102 A8MU10 97 aa6.48□□□□□ -1.37
CDKN3-209ENST00000556102 H7BZZ5 65 aa6.47□□□□□ -1.37
CDKN3-209ENST00000556102 KRTAP5-10Q6L8G5 202 aa6.46□□□□□ -1.38
CDKN3-209ENST00000556102 KRTAP4-2Q9BYR5 136 aa6.32□□□□□ -1.4
CDKN3-209ENST00000556102 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
CDKN3-209ENST00000556102 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
CDKN3-209ENST00000556102 KRTAP5-7Q6L8G8 165 aa6.26□□□□□ -1.41
CDKN3-209ENST00000556102 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
CDKN3-209ENST00000556102 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
CDKN3-209ENST00000556102 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
CDKN3-209ENST00000556102 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
CDKN3-209ENST00000556102 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
CDKN3-209ENST00000556102 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
CDKN3-209ENST00000556102 ANAPC13Q9BS18 74 aa6.09□□□□□ -1.43
CDKN3-209ENST00000556102 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
CDKN3-209ENST00000556102 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
CDKN3-209ENST00000556102 UQCR11O14957 56 aa5.99□□□□□ -1.45
CDKN3-209ENST00000556102 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
CDKN3-209ENST00000556102 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
CDKN3-209ENST00000556102 CCDC179H3BU77 68 aa5.98□□□□□ -1.45
CDKN3-209ENST00000556102 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
CDKN3-209ENST00000556102 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
CDKN3-209ENST00000556102 K7ERS5 55 aa5.78□□□□□ -1.48
CDKN3-209ENST00000556102 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
CDKN3-209ENST00000556102 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
CDKN3-209ENST00000556102 TMEM258P61165 79 aa5.75□□□□□ -1.49
CDKN3-209ENST00000556102 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
CDKN3-209ENST00000556102 MT1AP04731 61 aa5.68□□□□□ -1.5
CDKN3-209ENST00000556102 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
CDKN3-209ENST00000556102 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
CDKN3-209ENST00000556102 PSPHP1O15172 72 aa5.54□□□□□ -1.52
CDKN3-209ENST00000556102 V9GYY9 64 aa5.52□□□□□ -1.53
CDKN3-209ENST00000556102 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
CDKN3-209ENST00000556102 MUC5BQ9HC84 5762 aaPredicted RBP5.47□□□□□ -1.53
CDKN3-209ENST00000556102 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
CDKN3-209ENST00000556102 Q1T7F1 81 aa5.45□□□□□ -1.54
CDKN3-209ENST00000556102 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
CDKN3-209ENST00000556102 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CDKN3-209ENST00000556102 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
CDKN3-209ENST00000556102 RPS28P62857 69 aaKnown RBP5.38□□□□□ -1.55
CDKN3-209ENST00000556102 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
CDKN3-209ENST00000556102 A6NED7 52 aa5.34□□□□□ -1.55
CDKN3-209ENST00000556102 ROMO1P60602 79 aa5.32□□□□□ -1.56
CDKN3-209ENST00000556102 MT3P25713 68 aa5.21□□□□□ -1.58
CDKN3-209ENST00000556102 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
CDKN3-209ENST00000556102 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
CDKN3-209ENST00000556102 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
CDKN3-209ENST00000556102 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
CDKN3-209ENST00000556102 PCP4P48539 62 aa4.43□□□□□ -1.7
CDKN3-209ENST00000556102 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CDKN3-209ENST00000556102 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
CDKN3-209ENST00000556102 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
CDKN3-209ENST00000556102 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
CDKN3-209ENST00000556102 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
CDKN3-209ENST00000556102 SVIPQ8NHG7 77 aa4.08□□□□□ -1.76
CDKN3-209ENST00000556102 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
CDKN3-209ENST00000556102 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
CDKN3-209ENST00000556102 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
CDKN3-209ENST00000556102 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CDKN3-209ENST00000556102 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
CDKN3-209ENST00000556102 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
CDKN3-209ENST00000556102 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CDKN3-209ENST00000556102 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
CDKN3-209ENST00000556102 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
CDKN3-209ENST00000556102 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
CDKN3-209ENST00000556102 PRO0628Q9UI54 55 aa3.3□□□□□ -1.88
CDKN3-209ENST00000556102 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
CDKN3-209ENST00000556102 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
CDKN3-209ENST00000556102 PRM1P04553 51 aa2.7□□□□□ -1.98
CDKN3-209ENST00000556102 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
CDKN3-209ENST00000556102 INE1O15225 51 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 66 ms