RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
NPC2-208ENST00000556009 MT1EP04732 61 aa6.61□□□□□ -1.35
NPC2-208ENST00000556009 K7ERS5 55 aa6.54□□□□□ -1.36
NPC2-208ENST00000556009 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
NPC2-208ENST00000556009 MT1GP13640 62 aa6.46□□□□□ -1.38
NPC2-208ENST00000556009 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
NPC2-208ENST00000556009 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
NPC2-208ENST00000556009 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
NPC2-208ENST00000556009 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
NPC2-208ENST00000556009 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
NPC2-208ENST00000556009 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
NPC2-208ENST00000556009 TNP1P09430 55 aa6.34□□□□□ -1.39
NPC2-208ENST00000556009 MT4P47944 62 aa6.32□□□□□ -1.4
NPC2-208ENST00000556009 MT1MQ8N339 61 aa6.31□□□□□ -1.4
NPC2-208ENST00000556009 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
NPC2-208ENST00000556009 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
NPC2-208ENST00000556009 MT1LQ93083 61 aa6.27□□□□□ -1.41
NPC2-208ENST00000556009 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
NPC2-208ENST00000556009 KRTAP5-4Q6L8H1 288 aa6.21□□□□□ -1.42
NPC2-208ENST00000556009 KRTAP4-3Q9BYR4 195 aa6.2□□□□□ -1.42
NPC2-208ENST00000556009 ROMO1P60602 79 aa6.19□□□□□ -1.42
NPC2-208ENST00000556009 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
NPC2-208ENST00000556009 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
NPC2-208ENST00000556009 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
NPC2-208ENST00000556009 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
NPC2-208ENST00000556009 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
NPC2-208ENST00000556009 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
NPC2-208ENST00000556009 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
NPC2-208ENST00000556009 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
NPC2-208ENST00000556009 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
NPC2-208ENST00000556009 KRTAP5-7Q6L8G8 165 aa5.93□□□□□ -1.46
NPC2-208ENST00000556009 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
NPC2-208ENST00000556009 PRO0628Q9UI54 55 aa5.9□□□□□ -1.46
NPC2-208ENST00000556009 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
NPC2-208ENST00000556009 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
NPC2-208ENST00000556009 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
NPC2-208ENST00000556009 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
NPC2-208ENST00000556009 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
NPC2-208ENST00000556009 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
NPC2-208ENST00000556009 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
NPC2-208ENST00000556009 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
NPC2-208ENST00000556009 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
NPC2-208ENST00000556009 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
NPC2-208ENST00000556009 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
NPC2-208ENST00000556009 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
NPC2-208ENST00000556009 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
NPC2-208ENST00000556009 MT1AP04731 61 aa5.35□□□□□ -1.55
NPC2-208ENST00000556009 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
NPC2-208ENST00000556009 AHNAKQ09666 5890 aaKnown RBP5.29□□□□□ -1.56
NPC2-208ENST00000556009 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
NPC2-208ENST00000556009 KRTAP5-8O75690 187 aa5.25□□□□□ -1.57
NPC2-208ENST00000556009 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
NPC2-208ENST00000556009 MUC5BQ9HC84 5762 aaPredicted RBP5.22□□□□□ -1.57
NPC2-208ENST00000556009 MUC5ACP98088 5654 aa5.21□□□□□ -1.58
NPC2-208ENST00000556009 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
NPC2-208ENST00000556009 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
NPC2-208ENST00000556009 MT3P25713 68 aa4.91□□□□□ -1.62
NPC2-208ENST00000556009 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
NPC2-208ENST00000556009 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
NPC2-208ENST00000556009 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
NPC2-208ENST00000556009 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
NPC2-208ENST00000556009 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
NPC2-208ENST00000556009 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
NPC2-208ENST00000556009 H3BS24 57 aa4.13□□□□□ -1.75
NPC2-208ENST00000556009 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
NPC2-208ENST00000556009 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
NPC2-208ENST00000556009 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
NPC2-208ENST00000556009 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
NPC2-208ENST00000556009 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
NPC2-208ENST00000556009 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
NPC2-208ENST00000556009 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
NPC2-208ENST00000556009 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
NPC2-208ENST00000556009 INE1O15225 51 aa3.45□□□□□ -1.86
NPC2-208ENST00000556009 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
NPC2-208ENST00000556009 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
NPC2-208ENST00000556009 PRM1P04553 51 aa3.2□□□□□ -1.9
NPC2-208ENST00000556009 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
NPC2-208ENST00000556009 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 167.4 ms