RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
SLIRP-204ENST00000555890 A8MU10 97 aa3.26□□□□□ -1.89
SLIRP-204ENST00000555890 H0YAA0 97 aa3.26□□□□□ -1.89
SLIRP-204ENST00000555890 PMAIP1Q13794 54 aa3.24□□□□□ -1.89
SLIRP-204ENST00000555890 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SLIRP-204ENST00000555890 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
SLIRP-204ENST00000555890 SPRR2EP22531 72 aa3.23□□□□□ -1.89
SLIRP-204ENST00000555890 SPRR2BP35325 72 aa3.23□□□□□ -1.89
SLIRP-204ENST00000555890 SPRR2AP35326 72 aa3.23□□□□□ -1.89
SLIRP-204ENST00000555890 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
SLIRP-204ENST00000555890 P0C880 135 aa3.22□□□□□ -1.89
SLIRP-204ENST00000555890 K7ERS5 55 aa3.21□□□□□ -1.9
SLIRP-204ENST00000555890 M0QZ58 72 aa3.21□□□□□ -1.9
SLIRP-204ENST00000555890 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
SLIRP-204ENST00000555890 A6NN06 94 aa3.18□□□□□ -1.9
SLIRP-204ENST00000555890 A0A0D9SG42 100 aa3.16□□□□□ -1.9
SLIRP-204ENST00000555890 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
SLIRP-204ENST00000555890 R4GN34 69 aa3.16□□□□□ -1.9
SLIRP-204ENST00000555890 MT2AP02795 61 aa3.14□□□□□ -1.91
SLIRP-204ENST00000555890 SPRR2DP22532 72 aa3.14□□□□□ -1.91
SLIRP-204ENST00000555890 CRIPTQ9P021 101 aa3.13□□□□□ -1.91
SLIRP-204ENST00000555890 MT1FP04733 61 aa3.12□□□□□ -1.91
SLIRP-204ENST00000555890 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
SLIRP-204ENST00000555890 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
SLIRP-204ENST00000555890 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
SLIRP-204ENST00000555890 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
SLIRP-204ENST00000555890 KRTAP10-12P60413 245 aa3.07□□□□□ -1.92
SLIRP-204ENST00000555890 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
SLIRP-204ENST00000555890 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
SLIRP-204ENST00000555890 ROMO1P60602 79 aa3.04□□□□□ -1.92
SLIRP-204ENST00000555890 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
SLIRP-204ENST00000555890 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
SLIRP-204ENST00000555890 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
SLIRP-204ENST00000555890 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
SLIRP-204ENST00000555890 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
SLIRP-204ENST00000555890 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
SLIRP-204ENST00000555890 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.95
SLIRP-204ENST00000555890 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
SLIRP-204ENST00000555890 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
SLIRP-204ENST00000555890 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
SLIRP-204ENST00000555890 TNP1P09430 55 aa2.85□□□□□ -1.95
SLIRP-204ENST00000555890 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
SLIRP-204ENST00000555890 MT1BP07438 61 aa2.83□□□□□ -1.96
SLIRP-204ENST00000555890 MT4P47944 62 aa2.83□□□□□ -1.96
SLIRP-204ENST00000555890 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SLIRP-204ENST00000555890 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
SLIRP-204ENST00000555890 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
SLIRP-204ENST00000555890 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
SLIRP-204ENST00000555890 MT1XP80297 61 aa2.75□□□□□ -1.97
SLIRP-204ENST00000555890 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
SLIRP-204ENST00000555890 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
SLIRP-204ENST00000555890 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
SLIRP-204ENST00000555890 KRTAP12-3P60328 96 aa2.58□□□□□ -2
SLIRP-204ENST00000555890 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
SLIRP-204ENST00000555890 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
SLIRP-204ENST00000555890 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
SLIRP-204ENST00000555890 MT1EP04732 61 aa2.42□□□□□ -2.02
SLIRP-204ENST00000555890 SYNE1Q8NF91 8797 aaKnown RBP2.42□□□□□ -2.02
SLIRP-204ENST00000555890 MT1LQ93083 61 aa2.38□□□□□ -2.03
SLIRP-204ENST00000555890 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SLIRP-204ENST00000555890 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
SLIRP-204ENST00000555890 MT1GP13640 62 aa2.33□□□□□ -2.04
SLIRP-204ENST00000555890 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
SLIRP-204ENST00000555890 MT1MQ8N339 61 aa2.28□□□□□ -2.04
SLIRP-204ENST00000555890 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
SLIRP-204ENST00000555890 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
SLIRP-204ENST00000555890 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SLIRP-204ENST00000555890 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
SLIRP-204ENST00000555890 INE1O15225 51 aa2.07□□□□□ -2.08
SLIRP-204ENST00000555890 MT1AP04731 61 aa2.04□□□□□ -2.08
SLIRP-204ENST00000555890 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
SLIRP-204ENST00000555890 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
SLIRP-204ENST00000555890 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
SLIRP-204ENST00000555890 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SLIRP-204ENST00000555890 PRM1P04553 51 aa1.57□□□□□ -2.16
SLIRP-204ENST00000555890 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SLIRP-204ENST00000555890 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
SLIRP-204ENST00000555890 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 93.2 ms