RNA–Protein interactions for RNA: ENST00000555425.5

SEC23A-210, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5

Gene SEC23A, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-210ENST00000555425 UQCR11O14957 56 aa2.17□□□□□ -2.06
SEC23A-210ENST00000555425 Q5VV11 94 aa2.17□□□□□ -2.06
SEC23A-210ENST00000555425 A0A1B0GU69 56 aa2.16□□□□□ -2.06
SEC23A-210ENST00000555425 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
SEC23A-210ENST00000555425 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
SEC23A-210ENST00000555425 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
SEC23A-210ENST00000555425 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
SEC23A-210ENST00000555425 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
SEC23A-210ENST00000555425 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
SEC23A-210ENST00000555425 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
SEC23A-210ENST00000555425 MT1BP07438 61 aa2.11□□□□□ -2.07
SEC23A-210ENST00000555425 R4GN34 69 aa2.11□□□□□ -2.07
SEC23A-210ENST00000555425 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
SEC23A-210ENST00000555425 SPINT4Q6UDR6 99 aa2.1□□□□□ -2.07
SEC23A-210ENST00000555425 MIR22HGQ0VDD5 57 aa2.09□□□□□ -2.07
SEC23A-210ENST00000555425 A6NN06 94 aa2.08□□□□□ -2.08
SEC23A-210ENST00000555425 M0QZ58 72 aa2.08□□□□□ -2.08
SEC23A-210ENST00000555425 PRO2289Q9P1D8 64 aa2.08□□□□□ -2.08
SEC23A-210ENST00000555425 A0A1B0GU33 70 aa2.06□□□□□ -2.08
SEC23A-210ENST00000555425 P0C880 135 aa2.06□□□□□ -2.08
SEC23A-210ENST00000555425 PLAC4Q8WY50 150 aa2.06□□□□□ -2.08
SEC23A-210ENST00000555425 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
SEC23A-210ENST00000555425 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
SEC23A-210ENST00000555425 MT1XP80297 61 aa1.99□□□□□ -2.09
SEC23A-210ENST00000555425 LINC01554Q52M75 96 aa1.99□□□□□ -2.09
SEC23A-210ENST00000555425 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
SEC23A-210ENST00000555425 NEBP20929 6669 aa1.96□□□□□ -2.1
SEC23A-210ENST00000555425 KRTAP13-4Q3LI77 160 aa1.94□□□□□ -2.1
SEC23A-210ENST00000555425 ROMO1P60602 79 aa1.93□□□□□ -2.1
SEC23A-210ENST00000555425 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
SEC23A-210ENST00000555425 KMT2DO14686 5537 aa1.89□□□□□ -2.11
SEC23A-210ENST00000555425 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
SEC23A-210ENST00000555425 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
SEC23A-210ENST00000555425 PP632Q6XCG6 107 aa1.88□□□□□ -2.11
SEC23A-210ENST00000555425 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
SEC23A-210ENST00000555425 A0A0D9SG42 100 aa1.87□□□□□ -2.11
SEC23A-210ENST00000555425 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
SEC23A-210ENST00000555425 SPRR2EP22531 72 aa1.84□□□□□ -2.11
SEC23A-210ENST00000555425 SPRR2BP35325 72 aa1.84□□□□□ -2.11
SEC23A-210ENST00000555425 SPRR2AP35326 72 aa1.84□□□□□ -2.11
SEC23A-210ENST00000555425 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
SEC23A-210ENST00000555425 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
SEC23A-210ENST00000555425 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
SEC23A-210ENST00000555425 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
SEC23A-210ENST00000555425 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
SEC23A-210ENST00000555425 TNP1P09430 55 aa1.82□□□□□ -2.12
SEC23A-210ENST00000555425 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
SEC23A-210ENST00000555425 C10orf95Q9H7T3 257 aa1.79□□□□□ -2.12
SEC23A-210ENST00000555425 SPRR2DP22532 72 aa1.78□□□□□ -2.12
SEC23A-210ENST00000555425 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SEC23A-210ENST00000555425 MT1EP04732 61 aa1.77□□□□□ -2.13
SEC23A-210ENST00000555425 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
SEC23A-210ENST00000555425 MT1GP13640 62 aa1.76□□□□□ -2.13
SEC23A-210ENST00000555425 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
SEC23A-210ENST00000555425 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
SEC23A-210ENST00000555425 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
SEC23A-210ENST00000555425 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
SEC23A-210ENST00000555425 MT1LQ93083 61 aa1.7□□□□□ -2.14
SEC23A-210ENST00000555425 MT1MQ8N339 61 aa1.68□□□□□ -2.14
SEC23A-210ENST00000555425 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
SEC23A-210ENST00000555425 INE1O15225 51 aa1.52□□□□□ -2.17
SEC23A-210ENST00000555425 MT4P47944 62 aa1.52□□□□□ -2.17
SEC23A-210ENST00000555425 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
SEC23A-210ENST00000555425 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
SEC23A-210ENST00000555425 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
SEC23A-210ENST00000555425 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
SEC23A-210ENST00000555425 MT1AP04731 61 aa1.47□□□□□ -2.17
SEC23A-210ENST00000555425 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
SEC23A-210ENST00000555425 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
SEC23A-210ENST00000555425 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
SEC23A-210ENST00000555425 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
SEC23A-210ENST00000555425 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
SEC23A-210ENST00000555425 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
SEC23A-210ENST00000555425 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
SEC23A-210ENST00000555425 PRM1P04553 51 aa0.94□□□□□ -2.26
SEC23A-210ENST00000555425 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
SEC23A-210ENST00000555425 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
SEC23A-210ENST00000555425 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 156 ms