RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 UQCR11O14957 56 aa7.26□□□□□ -1.25
HIF1A-206ENST00000553999 MIR22HGQ0VDD5 57 aa7.14□□□□□ -1.27
HIF1A-206ENST00000553999 MT4P47944 62 aa7.13□□□□□ -1.27
HIF1A-206ENST00000553999 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
HIF1A-206ENST00000553999 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
HIF1A-206ENST00000553999 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
HIF1A-206ENST00000553999 PSPHP1O15172 72 aa7.08□□□□□ -1.28
HIF1A-206ENST00000553999 GPR98Q8WXG9 6306 aa7.04□□□□□ -1.28
HIF1A-206ENST00000553999 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
HIF1A-206ENST00000553999 K7ERS5 55 aa6.98□□□□□ -1.29
HIF1A-206ENST00000553999 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
HIF1A-206ENST00000553999 PCP4P48539 62 aa6.92□□□□□ -1.3
HIF1A-206ENST00000553999 V9GYY9 64 aa6.92□□□□□ -1.3
HIF1A-206ENST00000553999 Q1T7F1 81 aa6.89□□□□□ -1.31
HIF1A-206ENST00000553999 KRTAP5-4Q6L8H1 288 aa6.89□□□□□ -1.31
HIF1A-206ENST00000553999 HMCN1Q96RW7 5635 aa6.89□□□□□ -1.31
HIF1A-206ENST00000553999 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
HIF1A-206ENST00000553999 A6NED7 52 aa6.81□□□□□ -1.32
HIF1A-206ENST00000553999 LOC100996750A0A140TA64 210 aa6.72□□□□□ -1.33
HIF1A-206ENST00000553999 AHNAK2Q8IVF2 5795 aa6.68□□□□□ -1.34
HIF1A-206ENST00000553999 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.34
HIF1A-206ENST00000553999 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
HIF1A-206ENST00000553999 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
HIF1A-206ENST00000553999 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
HIF1A-206ENST00000553999 KRTAP20-2Q3LI61 65 aa6.57□□□□□ -1.36
HIF1A-206ENST00000553999 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
HIF1A-206ENST00000553999 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
HIF1A-206ENST00000553999 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
HIF1A-206ENST00000553999 ROMO1P60602 79 aa6.52□□□□□ -1.37
HIF1A-206ENST00000553999 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
HIF1A-206ENST00000553999 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
HIF1A-206ENST00000553999 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
HIF1A-206ENST00000553999 KRTAP5-3Q6L8H2 238 aa6.44□□□□□ -1.38
HIF1A-206ENST00000553999 SYNE1Q8NF91 8797 aaKnown RBP6.43□□□□□ -1.38
HIF1A-206ENST00000553999 KRTAP5-7Q6L8G8 165 aa6.27□□□□□ -1.41
HIF1A-206ENST00000553999 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
HIF1A-206ENST00000553999 MT1AP04731 61 aa6.23□□□□□ -1.41
HIF1A-206ENST00000553999 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
HIF1A-206ENST00000553999 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
HIF1A-206ENST00000553999 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
HIF1A-206ENST00000553999 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
HIF1A-206ENST00000553999 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
HIF1A-206ENST00000553999 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
HIF1A-206ENST00000553999 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
HIF1A-206ENST00000553999 MT3P25713 68 aa5.68□□□□□ -1.5
HIF1A-206ENST00000553999 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.5
HIF1A-206ENST00000553999 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
HIF1A-206ENST00000553999 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
HIF1A-206ENST00000553999 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
HIF1A-206ENST00000553999 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
HIF1A-206ENST00000553999 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.54
HIF1A-206ENST00000553999 KRTAP5-1Q6L8H4 278 aa5.44□□□□□ -1.54
HIF1A-206ENST00000553999 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
HIF1A-206ENST00000553999 PRAC1Q96KF2 57 aa5.38□□□□□ -1.55
HIF1A-206ENST00000553999 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
HIF1A-206ENST00000553999 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
HIF1A-206ENST00000553999 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
HIF1A-206ENST00000553999 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
HIF1A-206ENST00000553999 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
HIF1A-206ENST00000553999 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
HIF1A-206ENST00000553999 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
HIF1A-206ENST00000553999 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
HIF1A-206ENST00000553999 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
HIF1A-206ENST00000553999 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
HIF1A-206ENST00000553999 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
HIF1A-206ENST00000553999 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
HIF1A-206ENST00000553999 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
HIF1A-206ENST00000553999 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
HIF1A-206ENST00000553999 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
HIF1A-206ENST00000553999 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
HIF1A-206ENST00000553999 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
HIF1A-206ENST00000553999 H3BS24 57 aa3.66□□□□□ -1.82
HIF1A-206ENST00000553999 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
HIF1A-206ENST00000553999 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
HIF1A-206ENST00000553999 PRM1P04553 51 aa3.39□□□□□ -1.87
HIF1A-206ENST00000553999 INE1O15225 51 aa3.36□□□□□ -1.87
HIF1A-206ENST00000553999 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
HIF1A-206ENST00000553999 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms