RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 K7ERS5 55 aa2.27□□□□□ -2.05
FOXN3-205ENST00000553904 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
FOXN3-205ENST00000553904 MT4P47944 62 aa2.25□□□□□ -2.05
FOXN3-205ENST00000553904 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
FOXN3-205ENST00000553904 TMEM258P61165 79 aa2.25□□□□□ -2.05
FOXN3-205ENST00000553904 PCP4P48539 62 aa2.24□□□□□ -2.05
FOXN3-205ENST00000553904 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
FOXN3-205ENST00000553904 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
FOXN3-205ENST00000553904 KRTAP19-4Q3LI73 84 aa2.22□□□□□ -2.05
FOXN3-205ENST00000553904 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
FOXN3-205ENST00000553904 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
FOXN3-205ENST00000553904 V9GYY9 64 aa2.21□□□□□ -2.06
FOXN3-205ENST00000553904 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
FOXN3-205ENST00000553904 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
FOXN3-205ENST00000553904 KRTAP23-1A1A580 65 aa2.16□□□□□ -2.06
FOXN3-205ENST00000553904 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
FOXN3-205ENST00000553904 KRTAP4-7Q9BYR0 210 aa2.15□□□□□ -2.07
FOXN3-205ENST00000553904 PSPHP1O15172 72 aa2.13□□□□□ -2.07
FOXN3-205ENST00000553904 Q1T7F1 81 aa2.13□□□□□ -2.07
FOXN3-205ENST00000553904 SPRR5A0A1B0GTR4 108 aa2.12□□□□□ -2.07
FOXN3-205ENST00000553904 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
FOXN3-205ENST00000553904 KRTAP15-1Q3LI76 137 aa2.1□□□□□ -2.07
FOXN3-205ENST00000553904 A6NED7 52 aa2.09□□□□□ -2.07
FOXN3-205ENST00000553904 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
FOXN3-205ENST00000553904 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
FOXN3-205ENST00000553904 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
FOXN3-205ENST00000553904 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
FOXN3-205ENST00000553904 RPS28P62857 69 aaKnown RBP2.07□□□□□ -2.08
FOXN3-205ENST00000553904 LCE3CQ5T5A8 94 aa2.07□□□□□ -2.08
FOXN3-205ENST00000553904 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
FOXN3-205ENST00000553904 LOC100996750A0A140TA64 210 aa2.04□□□□□ -2.08
FOXN3-205ENST00000553904 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
FOXN3-205ENST00000553904 ROMO1P60602 79 aa2.03□□□□□ -2.08
FOXN3-205ENST00000553904 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
FOXN3-205ENST00000553904 MT1AP04731 61 aa1.97□□□□□ -2.09
FOXN3-205ENST00000553904 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
FOXN3-205ENST00000553904 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
FOXN3-205ENST00000553904 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
FOXN3-205ENST00000553904 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
FOXN3-205ENST00000553904 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
FOXN3-205ENST00000553904 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
FOXN3-205ENST00000553904 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
FOXN3-205ENST00000553904 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
FOXN3-205ENST00000553904 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
FOXN3-205ENST00000553904 MT3P25713 68 aa1.85□□□□□ -2.11
FOXN3-205ENST00000553904 PRO0628Q9UI54 55 aa1.83□□□□□ -2.12
FOXN3-205ENST00000553904 KRTAP9-9Q9BYP9 154 aa1.82□□□□□ -2.12
FOXN3-205ENST00000553904 BRK1Q8WUW1 75 aa1.76□□□□□ -2.13
FOXN3-205ENST00000553904 PMAIP1Q13794 54 aa1.73□□□□□ -2.13
FOXN3-205ENST00000553904 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
FOXN3-205ENST00000553904 LCE1EQ5T753 118 aa1.71□□□□□ -2.14
FOXN3-205ENST00000553904 H3BS24 57 aa1.68□□□□□ -2.14
FOXN3-205ENST00000553904 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
FOXN3-205ENST00000553904 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
FOXN3-205ENST00000553904 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
FOXN3-205ENST00000553904 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
FOXN3-205ENST00000553904 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
FOXN3-205ENST00000553904 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
FOXN3-205ENST00000553904 PRAC1Q96KF2 57 aa1.54□□□□□ -2.16
FOXN3-205ENST00000553904 KRTAP4-2Q9BYR5 136 aa1.54□□□□□ -2.16
FOXN3-205ENST00000553904 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
FOXN3-205ENST00000553904 A0A0A0MQY5 61 aa1.52□□□□□ -2.17
FOXN3-205ENST00000553904 LCE3DQ9BYE3 92 aa1.5□□□□□ -2.17
FOXN3-205ENST00000553904 LUZP6Q538Z0 58 aa1.43□□□□□ -2.18
FOXN3-205ENST00000553904 LCE1FQ5T754 118 aa1.42□□□□□ -2.18
FOXN3-205ENST00000553904 KRTAP4-12Q9BQ66 201 aa1.42□□□□□ -2.18
FOXN3-205ENST00000553904 LCE3EQ5T5B0 92 aa1.41□□□□□ -2.18
FOXN3-205ENST00000553904 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
FOXN3-205ENST00000553904 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
FOXN3-205ENST00000553904 NDUFAF8A1L188 74 aa1.37□□□□□ -2.19
FOXN3-205ENST00000553904 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
FOXN3-205ENST00000553904 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
FOXN3-205ENST00000553904 KRTAP4-4Q9BYR3 166 aa1.15□□□□□ -2.23
FOXN3-205ENST00000553904 INE1O15225 51 aa1.11□□□□□ -2.23
FOXN3-205ENST00000553904 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
FOXN3-205ENST00000553904 PRM1P04553 51 aa1□□□□□ -2.25
FOXN3-205ENST00000553904 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
FOXN3-205ENST00000553904 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 117.1 ms