RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
CLMN-202ENST00000553733 CCDC179H3BU77 68 aa6.27□□□□□ -1.41
CLMN-202ENST00000553733 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
CLMN-202ENST00000553733 KRTAP4-6Q9BYQ5 205 aa6.19□□□□□ -1.42
CLMN-202ENST00000553733 PRR15LQ9BU68 103 aa6.17□□□□□ -1.42
CLMN-202ENST00000553733 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
CLMN-202ENST00000553733 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
CLMN-202ENST00000553733 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
CLMN-202ENST00000553733 AHNAK2Q8IVF2 5795 aa6.15□□□□□ -1.43
CLMN-202ENST00000553733 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
CLMN-202ENST00000553733 KRTAP5-5Q701N2 237 aaPredicted RBP6.02□□□□□ -1.45
CLMN-202ENST00000553733 UQCR11O14957 56 aa5.99□□□□□ -1.45
CLMN-202ENST00000553733 TMEM258P61165 79 aa5.96□□□□□ -1.46
CLMN-202ENST00000553733 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
CLMN-202ENST00000553733 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
CLMN-202ENST00000553733 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
CLMN-202ENST00000553733 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
CLMN-202ENST00000553733 MIR22HGQ0VDD5 57 aa5.86□□□□□ -1.47
CLMN-202ENST00000553733 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
CLMN-202ENST00000553733 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
CLMN-202ENST00000553733 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
CLMN-202ENST00000553733 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
CLMN-202ENST00000553733 PSPHP1O15172 72 aa5.7□□□□□ -1.5
CLMN-202ENST00000553733 K7ERS5 55 aa5.69□□□□□ -1.5
CLMN-202ENST00000553733 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
CLMN-202ENST00000553733 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
CLMN-202ENST00000553733 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
CLMN-202ENST00000553733 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CLMN-202ENST00000553733 Q1T7F1 81 aa5.62□□□□□ -1.51
CLMN-202ENST00000553733 V9GYY9 64 aa5.59□□□□□ -1.51
CLMN-202ENST00000553733 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
CLMN-202ENST00000553733 MT1AP04731 61 aa5.51□□□□□ -1.53
CLMN-202ENST00000553733 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
CLMN-202ENST00000553733 A6NED7 52 aa5.45□□□□□ -1.54
CLMN-202ENST00000553733 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
CLMN-202ENST00000553733 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
CLMN-202ENST00000553733 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
CLMN-202ENST00000553733 ROMO1P60602 79 aa5.36□□□□□ -1.55
CLMN-202ENST00000553733 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
CLMN-202ENST00000553733 KRTAP5-8O75690 187 aa5.29□□□□□ -1.56
CLMN-202ENST00000553733 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
CLMN-202ENST00000553733 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
CLMN-202ENST00000553733 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
CLMN-202ENST00000553733 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
CLMN-202ENST00000553733 PCP4P48539 62 aa5.07□□□□□ -1.6
CLMN-202ENST00000553733 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
CLMN-202ENST00000553733 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
CLMN-202ENST00000553733 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
CLMN-202ENST00000553733 MT3P25713 68 aa4.99□□□□□ -1.61
CLMN-202ENST00000553733 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
CLMN-202ENST00000553733 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
CLMN-202ENST00000553733 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
CLMN-202ENST00000553733 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
CLMN-202ENST00000553733 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
CLMN-202ENST00000553733 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
CLMN-202ENST00000553733 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
CLMN-202ENST00000553733 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
CLMN-202ENST00000553733 H3BS24 57 aa4.3□□□□□ -1.72
CLMN-202ENST00000553733 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
CLMN-202ENST00000553733 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
CLMN-202ENST00000553733 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
CLMN-202ENST00000553733 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
CLMN-202ENST00000553733 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
CLMN-202ENST00000553733 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
CLMN-202ENST00000553733 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CLMN-202ENST00000553733 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
CLMN-202ENST00000553733 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
CLMN-202ENST00000553733 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
CLMN-202ENST00000553733 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
CLMN-202ENST00000553733 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
CLMN-202ENST00000553733 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
CLMN-202ENST00000553733 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
CLMN-202ENST00000553733 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CLMN-202ENST00000553733 PRM1P04553 51 aa2.77□□□□□ -1.97
CLMN-202ENST00000553733 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
CLMN-202ENST00000553733 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
CLMN-202ENST00000553733 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
CLMN-202ENST00000553733 INE1O15225 51 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 9531.1 ms