RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 K7ERS5 55 aa3□□□□□ -1.93
PCNX1-204ENST00000553428 MT1GP13640 62 aa3□□□□□ -1.93
PCNX1-204ENST00000553428 LCE3AQ5TA76 89 aa3□□□□□ -1.93
PCNX1-204ENST00000553428 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
PCNX1-204ENST00000553428 PCP4P48539 62 aa2.98□□□□□ -1.93
PCNX1-204ENST00000553428 PSPHP1O15172 72 aa2.97□□□□□ -1.93
PCNX1-204ENST00000553428 MT1LQ93083 61 aa2.96□□□□□ -1.94
PCNX1-204ENST00000553428 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
PCNX1-204ENST00000553428 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
PCNX1-204ENST00000553428 MT1MQ8N339 61 aa2.92□□□□□ -1.94
PCNX1-204ENST00000553428 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
PCNX1-204ENST00000553428 A6NED7 52 aa2.9□□□□□ -1.95
PCNX1-204ENST00000553428 KRTAP23-1A1A580 65 aa2.87□□□□□ -1.95
PCNX1-204ENST00000553428 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
PCNX1-204ENST00000553428 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
PCNX1-204ENST00000553428 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
PCNX1-204ENST00000553428 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
PCNX1-204ENST00000553428 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
PCNX1-204ENST00000553428 ROMO1P60602 79 aa2.77□□□□□ -1.97
PCNX1-204ENST00000553428 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
PCNX1-204ENST00000553428 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PCNX1-204ENST00000553428 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
PCNX1-204ENST00000553428 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
PCNX1-204ENST00000553428 KRTAP15-1Q3LI76 137 aa2.75□□□□□ -1.97
PCNX1-204ENST00000553428 MT4P47944 62 aa2.72□□□□□ -1.97
PCNX1-204ENST00000553428 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
PCNX1-204ENST00000553428 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
PCNX1-204ENST00000553428 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
PCNX1-204ENST00000553428 KRTAP9-4Q9BYQ2 154 aa2.63□□□□□ -1.99
PCNX1-204ENST00000553428 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
PCNX1-204ENST00000553428 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
PCNX1-204ENST00000553428 A0A0A0MQY5 61 aa2.61□□□□□ -1.99
PCNX1-204ENST00000553428 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
PCNX1-204ENST00000553428 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
PCNX1-204ENST00000553428 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
PCNX1-204ENST00000553428 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
PCNX1-204ENST00000553428 BRK1Q8WUW1 75 aa2.54□□□□□ -2
PCNX1-204ENST00000553428 MT1AP04731 61 aa2.53□□□□□ -2
PCNX1-204ENST00000553428 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
PCNX1-204ENST00000553428 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
PCNX1-204ENST00000553428 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
PCNX1-204ENST00000553428 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
PCNX1-204ENST00000553428 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
PCNX1-204ENST00000553428 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
PCNX1-204ENST00000553428 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
PCNX1-204ENST00000553428 PMAIP1Q13794 54 aa2.4□□□□□ -2.03
PCNX1-204ENST00000553428 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
PCNX1-204ENST00000553428 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
PCNX1-204ENST00000553428 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
PCNX1-204ENST00000553428 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
PCNX1-204ENST00000553428 MT3P25713 68 aa2.32□□□□□ -2.04
PCNX1-204ENST00000553428 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
PCNX1-204ENST00000553428 PRAC1Q96KF2 57 aa2.28□□□□□ -2.04
PCNX1-204ENST00000553428 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
PCNX1-204ENST00000553428 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
PCNX1-204ENST00000553428 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
PCNX1-204ENST00000553428 LCE1EQ5T753 118 aa2.14□□□□□ -2.07
PCNX1-204ENST00000553428 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.08
PCNX1-204ENST00000553428 NDUFAF8A1L188 74 aa2.08□□□□□ -2.08
PCNX1-204ENST00000553428 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
PCNX1-204ENST00000553428 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
PCNX1-204ENST00000553428 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
PCNX1-204ENST00000553428 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
PCNX1-204ENST00000553428 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
PCNX1-204ENST00000553428 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
PCNX1-204ENST00000553428 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
PCNX1-204ENST00000553428 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
PCNX1-204ENST00000553428 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
PCNX1-204ENST00000553428 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
PCNX1-204ENST00000553428 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
PCNX1-204ENST00000553428 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
PCNX1-204ENST00000553428 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PCNX1-204ENST00000553428 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
PCNX1-204ENST00000553428 PRM1P04553 51 aa1.39□□□□□ -2.19
PCNX1-204ENST00000553428 INE1O15225 51 aa1.32□□□□□ -2.2
PCNX1-204ENST00000553428 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
PCNX1-204ENST00000553428 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
PCNX1-204ENST00000553428 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms