RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
LETMD1-237ENST00000553175 TNXBP22105 4242 aa1.53□□□□□ -2.16
LETMD1-237ENST00000553175 RYR2Q92736 4967 aa1.53□□□□□ -2.16
LETMD1-237ENST00000553175 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
LETMD1-237ENST00000553175 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
LETMD1-237ENST00000553175 KRTAP8-1Q8IUC2 63 aa1.52□□□□□ -2.17
LETMD1-237ENST00000553175 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
LETMD1-237ENST00000553175 HSPG2P98160 4391 aa1.51□□□□□ -2.17
LETMD1-237ENST00000553175 FAT3Q8TDW7 4589 aa1.5□□□□□ -2.17
LETMD1-237ENST00000553175 STARD9Q9P2P6 4700 aa1.5□□□□□ -2.17
LETMD1-237ENST00000553175 UBR4Q5T4S7 5183 aa1.5□□□□□ -2.17
LETMD1-237ENST00000553175 FLGP20930 4061 aaPredicted RBP1.49□□□□□ -2.17
LETMD1-237ENST00000553175 FAT1Q14517 4588 aa1.48□□□□□ -2.17
LETMD1-237ENST00000553175 RYR1P21817 5038 aa1.47□□□□□ -2.17
LETMD1-237ENST00000553175 KIAA1109Q2LD37 5005 aa1.44□□□□□ -2.18
LETMD1-237ENST00000553175 SMR3BP02814 79 aaPredicted RBP1.44□□□□□ -2.18
LETMD1-237ENST00000553175 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
LETMD1-237ENST00000553175 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
LETMD1-237ENST00000553175 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
LETMD1-237ENST00000553175 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
LETMD1-237ENST00000553175 KRTAP19-2Q3LHN2 52 aa1.43□□□□□ -2.18
LETMD1-237ENST00000553175 SPRR2GQ9BYE4 73 aa1.4□□□□□ -2.19
LETMD1-237ENST00000553175 MT1HL1P0DM35 61 aa1.38□□□□□ -2.19
LETMD1-237ENST00000553175 HERC1Q15751 4861 aa1.37□□□□□ -2.19
LETMD1-237ENST00000553175 LPAP08519 4548 aa1.36□□□□□ -2.19
LETMD1-237ENST00000553175 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
LETMD1-237ENST00000553175 M0R2T5 61 aa1.3□□□□□ -2.2
LETMD1-237ENST00000553175 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
LETMD1-237ENST00000553175 MUC2Q02817 5179 aa1.29□□□□□ -2.2
LETMD1-237ENST00000553175 HMCN2Q8NDA2 5059 aa1.29□□□□□ -2.2
LETMD1-237ENST00000553175 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
LETMD1-237ENST00000553175 LRP2P98164 4655 aa1.27□□□□□ -2.21
LETMD1-237ENST00000553175 MT1XP80297 61 aa1.27□□□□□ -2.21
LETMD1-237ENST00000553175 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
LETMD1-237ENST00000553175 RNF213Q63HN8 5207 aa1.24□□□□□ -2.21
LETMD1-237ENST00000553175 MT1BP07438 61 aa1.22□□□□□ -2.21
LETMD1-237ENST00000553175 MT1EP04732 61 aa1.18□□□□□ -2.22
LETMD1-237ENST00000553175 MT2AP02795 61 aa1.17□□□□□ -2.22
LETMD1-237ENST00000553175 MT1AP04731 61 aa1.17□□□□□ -2.22
LETMD1-237ENST00000553175 MT1LQ93083 61 aa1.16□□□□□ -2.22
LETMD1-237ENST00000553175 MT1FP04733 61 aa1.15□□□□□ -2.23
LETMD1-237ENST00000553175 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
LETMD1-237ENST00000553175 FSIP2Q5CZC0 6907 aa1.13□□□□□ -2.23
LETMD1-237ENST00000553175 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
LETMD1-237ENST00000553175 PRM1P04553 51 aa1.11□□□□□ -2.23
LETMD1-237ENST00000553175 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
LETMD1-237ENST00000553175 MT1HP80294 61 aa1.1□□□□□ -2.23
LETMD1-237ENST00000553175 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
LETMD1-237ENST00000553175 USH2AO75445 5202 aa1.04□□□□□ -2.24
LETMD1-237ENST00000553175 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
LETMD1-237ENST00000553175 SYNE1Q8NF91 8797 aaKnown RBP1.04□□□□□ -2.24
LETMD1-237ENST00000553175 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
LETMD1-237ENST00000553175 MT1GP13640 62 aa1.01□□□□□ -2.25
LETMD1-237ENST00000553175 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
LETMD1-237ENST00000553175 SPRR2FQ96RM1 72 aa1.01□□□□□ -2.25
LETMD1-237ENST00000553175 MACF1Q9UPN3 7388 aaKnown RBP1□□□□□ -2.25
LETMD1-237ENST00000553175 NEBP20929 6669 aa1□□□□□ -2.25
LETMD1-237ENST00000553175 MT1MQ8N339 61 aa0.99□□□□□ -2.25
LETMD1-237ENST00000553175 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
LETMD1-237ENST00000553175 SPRR2AP35326 72 aa0.98□□□□□ -2.25
LETMD1-237ENST00000553175 SPRR2BP35325 72 aa0.96□□□□□ -2.26
LETMD1-237ENST00000553175 GPR98Q8WXG9 6306 aa0.95□□□□□ -2.26
LETMD1-237ENST00000553175 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
LETMD1-237ENST00000553175 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
LETMD1-237ENST00000553175 MUC12Q9UKN1 5478 aa0.93□□□□□ -2.26
LETMD1-237ENST00000553175 SPRR2EP22531 72 aa0.93□□□□□ -2.26
LETMD1-237ENST00000553175 KMT2DO14686 5537 aa0.93□□□□□ -2.26
LETMD1-237ENST00000553175 SPRR2DP22532 72 aa0.92□□□□□ -2.26
LETMD1-237ENST00000553175 KRTAP6-1Q3LI64 71 aa0.92□□□□□ -2.26
LETMD1-237ENST00000553175 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
LETMD1-237ENST00000553175 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
LETMD1-237ENST00000553175 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
LETMD1-237ENST00000553175 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.28
LETMD1-237ENST00000553175 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
LETMD1-237ENST00000553175 DSTQ03001 7570 aaKnown RBP0.74□□□□□ -2.29
LETMD1-237ENST00000553175 MT4P47944 62 aa0.7□□□□□ -2.3
LETMD1-237ENST00000553175 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
LETMD1-237ENST00000553175 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 100.4 ms