RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
TUBA1C-209ENST00000552448 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
TUBA1C-209ENST00000552448 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
TUBA1C-209ENST00000552448 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
TUBA1C-209ENST00000552448 MT1EP04732 61 aa3.81□□□□□ -1.8
TUBA1C-209ENST00000552448 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
TUBA1C-209ENST00000552448 MT1LQ93083 61 aa3.78□□□□□ -1.8
TUBA1C-209ENST00000552448 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
TUBA1C-209ENST00000552448 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
TUBA1C-209ENST00000552448 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
TUBA1C-209ENST00000552448 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
TUBA1C-209ENST00000552448 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
TUBA1C-209ENST00000552448 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
TUBA1C-209ENST00000552448 MT1GP13640 62 aa3.63□□□□□ -1.83
TUBA1C-209ENST00000552448 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
TUBA1C-209ENST00000552448 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
TUBA1C-209ENST00000552448 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
TUBA1C-209ENST00000552448 MT1MQ8N339 61 aa3.57□□□□□ -1.84
TUBA1C-209ENST00000552448 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
TUBA1C-209ENST00000552448 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
TUBA1C-209ENST00000552448 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
TUBA1C-209ENST00000552448 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
TUBA1C-209ENST00000552448 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
TUBA1C-209ENST00000552448 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
TUBA1C-209ENST00000552448 LCE3BQ5TA77 95 aa3.48□□□□□ -1.85
TUBA1C-209ENST00000552448 SPRR2EP22531 72 aa3.47□□□□□ -1.85
TUBA1C-209ENST00000552448 SPRR2BP35325 72 aa3.47□□□□□ -1.85
TUBA1C-209ENST00000552448 SPRR2AP35326 72 aa3.47□□□□□ -1.85
TUBA1C-209ENST00000552448 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
TUBA1C-209ENST00000552448 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
TUBA1C-209ENST00000552448 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
TUBA1C-209ENST00000552448 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
TUBA1C-209ENST00000552448 SPRR2DP22532 72 aa3.35□□□□□ -1.87
TUBA1C-209ENST00000552448 NEBP20929 6669 aa3.34□□□□□ -1.87
TUBA1C-209ENST00000552448 MT1AP04731 61 aa3.34□□□□□ -1.87
TUBA1C-209ENST00000552448 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
TUBA1C-209ENST00000552448 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
TUBA1C-209ENST00000552448 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
TUBA1C-209ENST00000552448 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
TUBA1C-209ENST00000552448 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
TUBA1C-209ENST00000552448 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
TUBA1C-209ENST00000552448 KRTAP4-9Q9BYQ8 210 aa3.17□□□□□ -1.9
TUBA1C-209ENST00000552448 PRM1P04553 51 aa3.14□□□□□ -1.91
TUBA1C-209ENST00000552448 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
TUBA1C-209ENST00000552448 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
TUBA1C-209ENST00000552448 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
TUBA1C-209ENST00000552448 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
TUBA1C-209ENST00000552448 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.93
TUBA1C-209ENST00000552448 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
TUBA1C-209ENST00000552448 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
TUBA1C-209ENST00000552448 MT3P25713 68 aa2.89□□□□□ -1.95
TUBA1C-209ENST00000552448 MT4P47944 62 aa2.86□□□□□ -1.95
TUBA1C-209ENST00000552448 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
TUBA1C-209ENST00000552448 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
TUBA1C-209ENST00000552448 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
TUBA1C-209ENST00000552448 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
TUBA1C-209ENST00000552448 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
TUBA1C-209ENST00000552448 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
TUBA1C-209ENST00000552448 LCE1EQ5T753 118 aa2.54□□□□□ -2
TUBA1C-209ENST00000552448 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
TUBA1C-209ENST00000552448 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
TUBA1C-209ENST00000552448 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
TUBA1C-209ENST00000552448 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
TUBA1C-209ENST00000552448 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
TUBA1C-209ENST00000552448 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
TUBA1C-209ENST00000552448 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
TUBA1C-209ENST00000552448 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
TUBA1C-209ENST00000552448 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
TUBA1C-209ENST00000552448 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.08
TUBA1C-209ENST00000552448 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
TUBA1C-209ENST00000552448 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
TUBA1C-209ENST00000552448 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
TUBA1C-209ENST00000552448 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
TUBA1C-209ENST00000552448 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
TUBA1C-209ENST00000552448 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
TUBA1C-209ENST00000552448 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
TUBA1C-209ENST00000552448 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
TUBA1C-209ENST00000552448 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 72.6 ms