RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
BRF1-220ENST00000552127 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
BRF1-220ENST00000552127 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
BRF1-220ENST00000552127 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
BRF1-220ENST00000552127 A8MU10 97 aa5.67□□□□□ -1.5
BRF1-220ENST00000552127 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
BRF1-220ENST00000552127 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
BRF1-220ENST00000552127 RPS28P62857 69 aaKnown RBP5.6□□□□□ -1.51
BRF1-220ENST00000552127 V9GYY9 64 aa5.6□□□□□ -1.51
BRF1-220ENST00000552127 Q1T7F1 81 aa5.59□□□□□ -1.51
BRF1-220ENST00000552127 KRTAP5-4Q6L8H1 288 aa5.58□□□□□ -1.52
BRF1-220ENST00000552127 PSPHP1O15172 72 aa5.55□□□□□ -1.52
BRF1-220ENST00000552127 MT1GP13640 62 aa5.54□□□□□ -1.52
BRF1-220ENST00000552127 C10orf95Q9H7T3 257 aa5.54□□□□□ -1.52
BRF1-220ENST00000552127 TNP1P09430 55 aa5.52□□□□□ -1.53
BRF1-220ENST00000552127 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
BRF1-220ENST00000552127 UQCR11O14957 56 aa5.5□□□□□ -1.53
BRF1-220ENST00000552127 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
BRF1-220ENST00000552127 MT1LQ93083 61 aa5.47□□□□□ -1.53
BRF1-220ENST00000552127 MT1MQ8N339 61 aa5.46□□□□□ -1.54
BRF1-220ENST00000552127 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
BRF1-220ENST00000552127 A6NED7 52 aa5.37□□□□□ -1.55
BRF1-220ENST00000552127 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
BRF1-220ENST00000552127 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
BRF1-220ENST00000552127 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
BRF1-220ENST00000552127 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
BRF1-220ENST00000552127 K7ERS5 55 aa5.23□□□□□ -1.57
BRF1-220ENST00000552127 AHNAKQ09666 5890 aaKnown RBP5.22□□□□□ -1.57
BRF1-220ENST00000552127 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
BRF1-220ENST00000552127 CDC42SE1Q9NRR8 79 aa5.2□□□□□ -1.58
BRF1-220ENST00000552127 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
BRF1-220ENST00000552127 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
BRF1-220ENST00000552127 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
BRF1-220ENST00000552127 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
BRF1-220ENST00000552127 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
BRF1-220ENST00000552127 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
BRF1-220ENST00000552127 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
BRF1-220ENST00000552127 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
BRF1-220ENST00000552127 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
BRF1-220ENST00000552127 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
BRF1-220ENST00000552127 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
BRF1-220ENST00000552127 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
BRF1-220ENST00000552127 ROMO1P60602 79 aa4.96□□□□□ -1.62
BRF1-220ENST00000552127 KRTAP15-1Q3LI76 137 aa4.93□□□□□ -1.62
BRF1-220ENST00000552127 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
BRF1-220ENST00000552127 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
BRF1-220ENST00000552127 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
BRF1-220ENST00000552127 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
BRF1-220ENST00000552127 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
BRF1-220ENST00000552127 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
BRF1-220ENST00000552127 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
BRF1-220ENST00000552127 MT1AP04731 61 aa4.67□□□□□ -1.66
BRF1-220ENST00000552127 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
BRF1-220ENST00000552127 KRTAP9-6A8MVA2 160 aa4.59□□□□□ -1.67
BRF1-220ENST00000552127 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
BRF1-220ENST00000552127 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
BRF1-220ENST00000552127 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
BRF1-220ENST00000552127 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
BRF1-220ENST00000552127 MT3P25713 68 aa4.25□□□□□ -1.73
BRF1-220ENST00000552127 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
BRF1-220ENST00000552127 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
BRF1-220ENST00000552127 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
BRF1-220ENST00000552127 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
BRF1-220ENST00000552127 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
BRF1-220ENST00000552127 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
BRF1-220ENST00000552127 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
BRF1-220ENST00000552127 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
BRF1-220ENST00000552127 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
BRF1-220ENST00000552127 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
BRF1-220ENST00000552127 INE1O15225 51 aa3.33□□□□□ -1.88
BRF1-220ENST00000552127 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
BRF1-220ENST00000552127 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
BRF1-220ENST00000552127 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
BRF1-220ENST00000552127 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
BRF1-220ENST00000552127 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
BRF1-220ENST00000552127 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
BRF1-220ENST00000552127 PRM1P04553 51 aa2.58□□□□□ -2
BRF1-220ENST00000552127 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 60.6 ms