RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
SLC48A1-208ENST00000551301 MT1LQ93083 61 aa7.21□□□□□ -1.26
SLC48A1-208ENST00000551301 MT1MQ8N339 61 aa7.2□□□□□ -1.26
SLC48A1-208ENST00000551301 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
SLC48A1-208ENST00000551301 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
SLC48A1-208ENST00000551301 KRTAP4-7Q9BYR0 210 aa7.13□□□□□ -1.27
SLC48A1-208ENST00000551301 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
SLC48A1-208ENST00000551301 UQCR11O14957 56 aa7.11□□□□□ -1.27
SLC48A1-208ENST00000551301 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
SLC48A1-208ENST00000551301 V9GYY9 64 aa7.08□□□□□ -1.28
SLC48A1-208ENST00000551301 MT4P47944 62 aa7.04□□□□□ -1.28
SLC48A1-208ENST00000551301 PCP4P48539 62 aa6.99□□□□□ -1.29
SLC48A1-208ENST00000551301 Q1T7F1 81 aa6.99□□□□□ -1.29
SLC48A1-208ENST00000551301 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
SLC48A1-208ENST00000551301 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
SLC48A1-208ENST00000551301 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
SLC48A1-208ENST00000551301 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
SLC48A1-208ENST00000551301 PSPHP1O15172 72 aa6.96□□□□□ -1.3
SLC48A1-208ENST00000551301 KRTAP5-4Q6L8H1 288 aa6.9□□□□□ -1.3
SLC48A1-208ENST00000551301 K7ERS5 55 aa6.86□□□□□ -1.31
SLC48A1-208ENST00000551301 KRTAP4-2Q9BYR5 136 aa6.86□□□□□ -1.31
SLC48A1-208ENST00000551301 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
SLC48A1-208ENST00000551301 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
SLC48A1-208ENST00000551301 A6NED7 52 aa6.77□□□□□ -1.33
SLC48A1-208ENST00000551301 AHNAK2Q8IVF2 5795 aa6.73□□□□□ -1.33
SLC48A1-208ENST00000551301 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
SLC48A1-208ENST00000551301 KRTAP5-10Q6L8G5 202 aa6.62□□□□□ -1.35
SLC48A1-208ENST00000551301 KRTAP12-4P60329 112 aa6.57□□□□□ -1.36
SLC48A1-208ENST00000551301 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
SLC48A1-208ENST00000551301 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
SLC48A1-208ENST00000551301 KRTAP4-11Q9BYQ6 195 aa6.55□□□□□ -1.36
SLC48A1-208ENST00000551301 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
SLC48A1-208ENST00000551301 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
SLC48A1-208ENST00000551301 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
SLC48A1-208ENST00000551301 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
SLC48A1-208ENST00000551301 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
SLC48A1-208ENST00000551301 KRTAP5-7Q6L8G8 165 aa6.41□□□□□ -1.38
SLC48A1-208ENST00000551301 LCE3CQ5T5A8 94 aa6.4□□□□□ -1.38
SLC48A1-208ENST00000551301 ROMO1P60602 79 aa6.37□□□□□ -1.39
SLC48A1-208ENST00000551301 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
SLC48A1-208ENST00000551301 MT1AP04731 61 aa6.15□□□□□ -1.42
SLC48A1-208ENST00000551301 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
SLC48A1-208ENST00000551301 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
SLC48A1-208ENST00000551301 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
SLC48A1-208ENST00000551301 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
SLC48A1-208ENST00000551301 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
SLC48A1-208ENST00000551301 KRTAP6-2Q3LI66 62 aa5.86□□□□□ -1.47
SLC48A1-208ENST00000551301 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
SLC48A1-208ENST00000551301 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
SLC48A1-208ENST00000551301 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
SLC48A1-208ENST00000551301 MT3P25713 68 aa5.67□□□□□ -1.5
SLC48A1-208ENST00000551301 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
SLC48A1-208ENST00000551301 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
SLC48A1-208ENST00000551301 MUC5BQ9HC84 5762 aaPredicted RBP5.58□□□□□ -1.52
SLC48A1-208ENST00000551301 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
SLC48A1-208ENST00000551301 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
SLC48A1-208ENST00000551301 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
SLC48A1-208ENST00000551301 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
SLC48A1-208ENST00000551301 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
SLC48A1-208ENST00000551301 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
SLC48A1-208ENST00000551301 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
SLC48A1-208ENST00000551301 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SLC48A1-208ENST00000551301 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
SLC48A1-208ENST00000551301 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
SLC48A1-208ENST00000551301 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
SLC48A1-208ENST00000551301 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
SLC48A1-208ENST00000551301 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
SLC48A1-208ENST00000551301 H3BS24 57 aa4.15□□□□□ -1.75
SLC48A1-208ENST00000551301 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
SLC48A1-208ENST00000551301 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
SLC48A1-208ENST00000551301 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
SLC48A1-208ENST00000551301 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
SLC48A1-208ENST00000551301 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
SLC48A1-208ENST00000551301 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
SLC48A1-208ENST00000551301 PRM1P04553 51 aa3.26□□□□□ -1.89
SLC48A1-208ENST00000551301 INE1O15225 51 aa3.18□□□□□ -1.9
SLC48A1-208ENST00000551301 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
SLC48A1-208ENST00000551301 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 14.6 ms