RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 M0QZ58 72 aa1.15□□□□□ -2.23
RAB3IP-214ENST00000550847 HSPG2P98160 4391 aa1.15□□□□□ -2.23
RAB3IP-214ENST00000550847 KIAA1109Q2LD37 5005 aa1.13□□□□□ -2.23
RAB3IP-214ENST00000550847 MYCBP2O75592 4640 aa1.13□□□□□ -2.23
RAB3IP-214ENST00000550847 MT1HL1P0DM35 61 aa1.12□□□□□ -2.23
RAB3IP-214ENST00000550847 CRIPTQ9P021 101 aa1.12□□□□□ -2.23
RAB3IP-214ENST00000550847 DMBT1Q9UGM3 2413 aaPredicted RBP1.11□□□□□ -2.23
RAB3IP-214ENST00000550847 LRP1Q07954 4544 aaKnown RBP1.11□□□□□ -2.23
RAB3IP-214ENST00000550847 EPPK1P58107 5090 aaKnown RBP1.11□□□□□ -2.23
RAB3IP-214ENST00000550847 HERC2O95714 4834 aa1.09□□□□□ -2.23
RAB3IP-214ENST00000550847 BIRC6Q9NR09 4857 aa1.09□□□□□ -2.23
RAB3IP-214ENST00000550847 ABCA13Q86UQ4 5058 aa1.09□□□□□ -2.23
RAB3IP-214ENST00000550847 LRP2P98164 4655 aa1.06□□□□□ -2.24
RAB3IP-214ENST00000550847 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
RAB3IP-214ENST00000550847 HMCN2Q8NDA2 5059 aa1.05□□□□□ -2.24
RAB3IP-214ENST00000550847 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
RAB3IP-214ENST00000550847 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
RAB3IP-214ENST00000550847 HERC1Q15751 4861 aa1.04□□□□□ -2.24
RAB3IP-214ENST00000550847 TNP1P09430 55 aa1.03□□□□□ -2.24
RAB3IP-214ENST00000550847 LPAP08519 4548 aa1.03□□□□□ -2.25
RAB3IP-214ENST00000550847 FLGP20930 4061 aaPredicted RBP1.02□□□□□ -2.25
RAB3IP-214ENST00000550847 M0R2T5 61 aa1.02□□□□□ -2.25
RAB3IP-214ENST00000550847 UBR4Q5T4S7 5183 aa1□□□□□ -2.25
RAB3IP-214ENST00000550847 RNF213Q63HN8 5207 aa0.99□□□□□ -2.25
RAB3IP-214ENST00000550847 SPRR2GQ9BYE4 73 aa0.99□□□□□ -2.25
RAB3IP-214ENST00000550847 MUC2Q02817 5179 aa0.99□□□□□ -2.25
RAB3IP-214ENST00000550847 KRTAP19-2Q3LHN2 52 aa0.98□□□□□ -2.25
RAB3IP-214ENST00000550847 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
RAB3IP-214ENST00000550847 FAT4Q6V0I7 4981 aa0.96□□□□□ -2.26
RAB3IP-214ENST00000550847 MT1HP80294 61 aa0.95□□□□□ -2.26
RAB3IP-214ENST00000550847 KRTAP19-8Q3LI54 63 aa0.94□□□□□ -2.26
RAB3IP-214ENST00000550847 MT2AP02795 61 aa0.93□□□□□ -2.26
RAB3IP-214ENST00000550847 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
RAB3IP-214ENST00000550847 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
RAB3IP-214ENST00000550847 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
RAB3IP-214ENST00000550847 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
RAB3IP-214ENST00000550847 MT1FP04733 61 aa0.91□□□□□ -2.26
RAB3IP-214ENST00000550847 KRTAP8-1Q8IUC2 63 aa0.91□□□□□ -2.26
RAB3IP-214ENST00000550847 MT1BP07438 61 aa0.88□□□□□ -2.27
RAB3IP-214ENST00000550847 MT1XP80297 61 aa0.87□□□□□ -2.27
RAB3IP-214ENST00000550847 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
RAB3IP-214ENST00000550847 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
RAB3IP-214ENST00000550847 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
RAB3IP-214ENST00000550847 USH2AO75445 5202 aa0.83□□□□□ -2.28
RAB3IP-214ENST00000550847 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
RAB3IP-214ENST00000550847 KRTAP19-5Q3LI72 72 aa0.81□□□□□ -2.28
RAB3IP-214ENST00000550847 SSPOA2VEC9 5147 aa0.81□□□□□ -2.28
RAB3IP-214ENST00000550847 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
RAB3IP-214ENST00000550847 NEBP20929 6669 aa0.78□□□□□ -2.28
RAB3IP-214ENST00000550847 KMT2DO14686 5537 aa0.78□□□□□ -2.28
RAB3IP-214ENST00000550847 MT1EP04732 61 aa0.78□□□□□ -2.28
RAB3IP-214ENST00000550847 KRTAP19-7Q3SYF9 63 aa0.77□□□□□ -2.29
RAB3IP-214ENST00000550847 MT1LQ93083 61 aa0.77□□□□□ -2.29
RAB3IP-214ENST00000550847 MT1GP13640 62 aa0.76□□□□□ -2.29
RAB3IP-214ENST00000550847 DSTQ03001 7570 aaKnown RBP0.74□□□□□ -2.29
RAB3IP-214ENST00000550847 MDN1Q9NU22 5596 aa0.73□□□□□ -2.29
RAB3IP-214ENST00000550847 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
RAB3IP-214ENST00000550847 MT1MQ8N339 61 aa0.72□□□□□ -2.29
RAB3IP-214ENST00000550847 SPRR2FQ96RM1 72 aa0.72□□□□□ -2.29
RAB3IP-214ENST00000550847 MT1AP04731 61 aa0.69□□□□□ -2.3
RAB3IP-214ENST00000550847 SPRR2EP22531 72 aa0.68□□□□□ -2.3
RAB3IP-214ENST00000550847 SPRR2BP35325 72 aa0.68□□□□□ -2.3
RAB3IP-214ENST00000550847 SPRR2AP35326 72 aa0.68□□□□□ -2.3
RAB3IP-214ENST00000550847 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
RAB3IP-214ENST00000550847 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
RAB3IP-214ENST00000550847 SPRR2DP22532 72 aa0.65□□□□□ -2.31
RAB3IP-214ENST00000550847 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
RAB3IP-214ENST00000550847 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RAB3IP-214ENST00000550847 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
RAB3IP-214ENST00000550847 PRM1P04553 51 aa0.57□□□□□ -2.32
RAB3IP-214ENST00000550847 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
RAB3IP-214ENST00000550847 KRTAP20-1Q3LI63 56 aa0.56□□□□□ -2.32
RAB3IP-214ENST00000550847 KRTAP20-2Q3LI61 65 aa0.54□□□□□ -2.32
RAB3IP-214ENST00000550847 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
RAB3IP-214ENST00000550847 MT4P47944 62 aa0.53□□□□□ -2.32
RAB3IP-214ENST00000550847 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
RAB3IP-214ENST00000550847 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 71.5 ms