RNA–Protein interactions for RNA: ENST00000550724.2

HECTD4-212, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-212ENST00000550724 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
HECTD4-212ENST00000550724 TMEM258P61165 79 aa5.15□□□□□ -1.59
HECTD4-212ENST00000550724 MT1LQ93083 61 aa5.14□□□□□ -1.59
HECTD4-212ENST00000550724 MT1MQ8N339 61 aa5.13□□□□□ -1.59
HECTD4-212ENST00000550724 UQCR11O14957 56 aa5.11□□□□□ -1.59
HECTD4-212ENST00000550724 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
HECTD4-212ENST00000550724 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
HECTD4-212ENST00000550724 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
HECTD4-212ENST00000550724 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
HECTD4-212ENST00000550724 MIR22HGQ0VDD5 57 aa5.01□□□□□ -1.61
HECTD4-212ENST00000550724 MT4P47944 62 aa5□□□□□ -1.61
HECTD4-212ENST00000550724 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
HECTD4-212ENST00000550724 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
HECTD4-212ENST00000550724 K7ERS5 55 aa4.94□□□□□ -1.62
HECTD4-212ENST00000550724 PSPHP1O15172 72 aa4.93□□□□□ -1.62
HECTD4-212ENST00000550724 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.62
HECTD4-212ENST00000550724 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
HECTD4-212ENST00000550724 V9GYY9 64 aa4.89□□□□□ -1.63
HECTD4-212ENST00000550724 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
HECTD4-212ENST00000550724 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
HECTD4-212ENST00000550724 Q1T7F1 81 aa4.83□□□□□ -1.64
HECTD4-212ENST00000550724 A6NED7 52 aa4.76□□□□□ -1.65
HECTD4-212ENST00000550724 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
HECTD4-212ENST00000550724 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
HECTD4-212ENST00000550724 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
HECTD4-212ENST00000550724 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
HECTD4-212ENST00000550724 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
HECTD4-212ENST00000550724 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
HECTD4-212ENST00000550724 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
HECTD4-212ENST00000550724 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
HECTD4-212ENST00000550724 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
HECTD4-212ENST00000550724 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
HECTD4-212ENST00000550724 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
HECTD4-212ENST00000550724 ROMO1P60602 79 aa4.58□□□□□ -1.68
HECTD4-212ENST00000550724 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
HECTD4-212ENST00000550724 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
HECTD4-212ENST00000550724 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
HECTD4-212ENST00000550724 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
HECTD4-212ENST00000550724 PCP4P48539 62 aa4.49□□□□□ -1.69
HECTD4-212ENST00000550724 H3BS24 57 aa4.47□□□□□ -1.69
HECTD4-212ENST00000550724 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
HECTD4-212ENST00000550724 MT1AP04731 61 aa4.37□□□□□ -1.71
HECTD4-212ENST00000550724 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
HECTD4-212ENST00000550724 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
HECTD4-212ENST00000550724 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
HECTD4-212ENST00000550724 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
HECTD4-212ENST00000550724 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
HECTD4-212ENST00000550724 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
HECTD4-212ENST00000550724 MT3P25713 68 aa4.01□□□□□ -1.77
HECTD4-212ENST00000550724 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
HECTD4-212ENST00000550724 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
HECTD4-212ENST00000550724 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
HECTD4-212ENST00000550724 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
HECTD4-212ENST00000550724 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
HECTD4-212ENST00000550724 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
HECTD4-212ENST00000550724 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
HECTD4-212ENST00000550724 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
HECTD4-212ENST00000550724 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
HECTD4-212ENST00000550724 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
HECTD4-212ENST00000550724 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
HECTD4-212ENST00000550724 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
HECTD4-212ENST00000550724 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
HECTD4-212ENST00000550724 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
HECTD4-212ENST00000550724 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
HECTD4-212ENST00000550724 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
HECTD4-212ENST00000550724 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
HECTD4-212ENST00000550724 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
HECTD4-212ENST00000550724 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
HECTD4-212ENST00000550724 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
HECTD4-212ENST00000550724 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
HECTD4-212ENST00000550724 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
HECTD4-212ENST00000550724 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
HECTD4-212ENST00000550724 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
HECTD4-212ENST00000550724 NDUFAF8A1L188 74 aa2.45□□□□□ -2.02
HECTD4-212ENST00000550724 PRM1P04553 51 aa2.36□□□□□ -2.03
HECTD4-212ENST00000550724 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
HECTD4-212ENST00000550724 INE1O15225 51 aa1.9□□□□□ -2.11
HECTD4-212ENST00000550724 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 4.9 ms