RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
DEPDC4-209ENST00000550587 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
DEPDC4-209ENST00000550587 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
DEPDC4-209ENST00000550587 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
DEPDC4-209ENST00000550587 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
DEPDC4-209ENST00000550587 KMT2DO14686 5537 aa2.75□□□□□ -1.97
DEPDC4-209ENST00000550587 A6NN06 94 aa2.74□□□□□ -1.97
DEPDC4-209ENST00000550587 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
DEPDC4-209ENST00000550587 CDC42SE1Q9NRR8 79 aa2.74□□□□□ -1.97
DEPDC4-209ENST00000550587 A8MU10 97 aa2.71□□□□□ -1.98
DEPDC4-209ENST00000550587 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
DEPDC4-209ENST00000550587 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
DEPDC4-209ENST00000550587 A0A0D9SG42 100 aa2.7□□□□□ -1.98
DEPDC4-209ENST00000550587 LINC01554Q52M75 96 aa2.7□□□□□ -1.98
DEPDC4-209ENST00000550587 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
DEPDC4-209ENST00000550587 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
DEPDC4-209ENST00000550587 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
DEPDC4-209ENST00000550587 K7ERS5 55 aa2.66□□□□□ -1.98
DEPDC4-209ENST00000550587 KRTAP2-1Q9BYU5 128 aa2.65□□□□□ -1.99
DEPDC4-209ENST00000550587 PRO0628Q9UI54 55 aa2.65□□□□□ -1.99
DEPDC4-209ENST00000550587 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
DEPDC4-209ENST00000550587 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
DEPDC4-209ENST00000550587 SPINT4Q6UDR6 99 aa2.64□□□□□ -1.99
DEPDC4-209ENST00000550587 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
DEPDC4-209ENST00000550587 MT1BP07438 61 aa2.62□□□□□ -1.99
DEPDC4-209ENST00000550587 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
DEPDC4-209ENST00000550587 CAMK2N1Q7Z7J9 78 aa2.59□□□□□ -1.99
DEPDC4-209ENST00000550587 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
DEPDC4-209ENST00000550587 SPRR2EP22531 72 aa2.54□□□□□ -2
DEPDC4-209ENST00000550587 SPRR2BP35325 72 aa2.54□□□□□ -2
DEPDC4-209ENST00000550587 SPRR2AP35326 72 aa2.54□□□□□ -2
DEPDC4-209ENST00000550587 ROMO1P60602 79 aa2.54□□□□□ -2
DEPDC4-209ENST00000550587 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
DEPDC4-209ENST00000550587 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
DEPDC4-209ENST00000550587 MT1XP80297 61 aa2.53□□□□□ -2
DEPDC4-209ENST00000550587 C10orf95Q9H7T3 257 aa2.53□□□□□ -2
DEPDC4-209ENST00000550587 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
DEPDC4-209ENST00000550587 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
DEPDC4-209ENST00000550587 TNP1P09430 55 aa2.47□□□□□ -2.01
DEPDC4-209ENST00000550587 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
DEPDC4-209ENST00000550587 SPRR2DP22532 72 aa2.46□□□□□ -2.02
DEPDC4-209ENST00000550587 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
DEPDC4-209ENST00000550587 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
DEPDC4-209ENST00000550587 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
DEPDC4-209ENST00000550587 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
DEPDC4-209ENST00000550587 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
DEPDC4-209ENST00000550587 PP632Q6XCG6 107 aa2.39□□□□□ -2.03
DEPDC4-209ENST00000550587 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
DEPDC4-209ENST00000550587 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
DEPDC4-209ENST00000550587 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
DEPDC4-209ENST00000550587 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
DEPDC4-209ENST00000550587 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.05
DEPDC4-209ENST00000550587 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
DEPDC4-209ENST00000550587 KRTAP19-7Q3SYF9 63 aa2.26□□□□□ -2.05
DEPDC4-209ENST00000550587 MT1EP04732 61 aa2.22□□□□□ -2.05
DEPDC4-209ENST00000550587 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
DEPDC4-209ENST00000550587 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
DEPDC4-209ENST00000550587 MT1LQ93083 61 aa2.17□□□□□ -2.06
DEPDC4-209ENST00000550587 MT1GP13640 62 aa2.16□□□□□ -2.06
DEPDC4-209ENST00000550587 MT4P47944 62 aa2.15□□□□□ -2.07
DEPDC4-209ENST00000550587 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
DEPDC4-209ENST00000550587 MT1MQ8N339 61 aa2.09□□□□□ -2.07
DEPDC4-209ENST00000550587 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
DEPDC4-209ENST00000550587 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
DEPDC4-209ENST00000550587 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
DEPDC4-209ENST00000550587 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
DEPDC4-209ENST00000550587 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
DEPDC4-209ENST00000550587 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
DEPDC4-209ENST00000550587 MT1AP04731 61 aa1.85□□□□□ -2.11
DEPDC4-209ENST00000550587 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
DEPDC4-209ENST00000550587 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
DEPDC4-209ENST00000550587 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
DEPDC4-209ENST00000550587 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
DEPDC4-209ENST00000550587 INE1O15225 51 aa1.59□□□□□ -2.15
DEPDC4-209ENST00000550587 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
DEPDC4-209ENST00000550587 PRM1P04553 51 aa1.3□□□□□ -2.2
DEPDC4-209ENST00000550587 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
DEPDC4-209ENST00000550587 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 97.1 ms