RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
RAB5C-205ENST00000550013 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
RAB5C-205ENST00000550013 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
RAB5C-205ENST00000550013 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
RAB5C-205ENST00000550013 COA5Q86WW8 74 aa5.41□□□□□ -1.54
RAB5C-205ENST00000550013 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
RAB5C-205ENST00000550013 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
RAB5C-205ENST00000550013 PSPHP1O15172 72 aa5.33□□□□□ -1.56
RAB5C-205ENST00000550013 SEC61GP60059 68 aa5.33□□□□□ -1.56
RAB5C-205ENST00000550013 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
RAB5C-205ENST00000550013 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
RAB5C-205ENST00000550013 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
RAB5C-205ENST00000550013 A0A1B0GU33 70 aa5.3□□□□□ -1.56
RAB5C-205ENST00000550013 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
RAB5C-205ENST00000550013 KRTAP5-7Q6L8G8 165 aa5.27□□□□□ -1.57
RAB5C-205ENST00000550013 A6NED7 52 aa5.26□□□□□ -1.57
RAB5C-205ENST00000550013 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
RAB5C-205ENST00000550013 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
RAB5C-205ENST00000550013 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
RAB5C-205ENST00000550013 TNP1P09430 55 aa5.17□□□□□ -1.58
RAB5C-205ENST00000550013 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
RAB5C-205ENST00000550013 A0A1B0GU69 56 aa5.16□□□□□ -1.58
RAB5C-205ENST00000550013 A8MU10 97 aa5.16□□□□□ -1.58
RAB5C-205ENST00000550013 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
RAB5C-205ENST00000550013 UQCR11O14957 56 aa5.1□□□□□ -1.59
RAB5C-205ENST00000550013 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
RAB5C-205ENST00000550013 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
RAB5C-205ENST00000550013 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
RAB5C-205ENST00000550013 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
RAB5C-205ENST00000550013 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
RAB5C-205ENST00000550013 KRTAP12-4P60329 112 aa5□□□□□ -1.61
RAB5C-205ENST00000550013 LOC100996750A0A140TA64 210 aa4.95□□□□□ -1.62
RAB5C-205ENST00000550013 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
RAB5C-205ENST00000550013 K7ERS5 55 aa4.88□□□□□ -1.63
RAB5C-205ENST00000550013 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
RAB5C-205ENST00000550013 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
RAB5C-205ENST00000550013 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
RAB5C-205ENST00000550013 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
RAB5C-205ENST00000550013 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
RAB5C-205ENST00000550013 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
RAB5C-205ENST00000550013 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
RAB5C-205ENST00000550013 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
RAB5C-205ENST00000550013 LCE3CQ5T5A8 94 aa4.64□□□□□ -1.67
RAB5C-205ENST00000550013 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
RAB5C-205ENST00000550013 MT1AP04731 61 aa4.63□□□□□ -1.67
RAB5C-205ENST00000550013 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
RAB5C-205ENST00000550013 ROMO1P60602 79 aa4.62□□□□□ -1.67
RAB5C-205ENST00000550013 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
RAB5C-205ENST00000550013 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
RAB5C-205ENST00000550013 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
RAB5C-205ENST00000550013 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
RAB5C-205ENST00000550013 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
RAB5C-205ENST00000550013 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
RAB5C-205ENST00000550013 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
RAB5C-205ENST00000550013 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
RAB5C-205ENST00000550013 MT3P25713 68 aa4.24□□□□□ -1.73
RAB5C-205ENST00000550013 H3BS24 57 aa4.08□□□□□ -1.76
RAB5C-205ENST00000550013 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
RAB5C-205ENST00000550013 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
RAB5C-205ENST00000550013 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
RAB5C-205ENST00000550013 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
RAB5C-205ENST00000550013 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
RAB5C-205ENST00000550013 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
RAB5C-205ENST00000550013 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
RAB5C-205ENST00000550013 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
RAB5C-205ENST00000550013 INE1O15225 51 aa3.44□□□□□ -1.86
RAB5C-205ENST00000550013 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
RAB5C-205ENST00000550013 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
RAB5C-205ENST00000550013 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
RAB5C-205ENST00000550013 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
RAB5C-205ENST00000550013 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
RAB5C-205ENST00000550013 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
RAB5C-205ENST00000550013 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
RAB5C-205ENST00000550013 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
RAB5C-205ENST00000550013 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
RAB5C-205ENST00000550013 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
RAB5C-205ENST00000550013 PRM1P04553 51 aa2.37□□□□□ -2.03
RAB5C-205ENST00000550013 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 81.6 ms