RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 KRTAP4-9Q9BYQ8 210 aa3.45□□□□□ -1.86
HDAC7-229ENST00000549883 UQCR11O14957 56 aa3.44□□□□□ -1.86
HDAC7-229ENST00000549883 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
HDAC7-229ENST00000549883 PP632Q6XCG6 107 aa3.41□□□□□ -1.86
HDAC7-229ENST00000549883 PSPHP1O15172 72 aa3.39□□□□□ -1.87
HDAC7-229ENST00000549883 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
HDAC7-229ENST00000549883 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
HDAC7-229ENST00000549883 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
HDAC7-229ENST00000549883 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
HDAC7-229ENST00000549883 Q1T7F1 81 aa3.33□□□□□ -1.88
HDAC7-229ENST00000549883 MT4P47944 62 aa3.32□□□□□ -1.88
HDAC7-229ENST00000549883 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
HDAC7-229ENST00000549883 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
HDAC7-229ENST00000549883 V9GYY9 64 aa3.29□□□□□ -1.88
HDAC7-229ENST00000549883 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
HDAC7-229ENST00000549883 K7ERS5 55 aa3.25□□□□□ -1.89
HDAC7-229ENST00000549883 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
HDAC7-229ENST00000549883 A6NED7 52 aa3.23□□□□□ -1.89
HDAC7-229ENST00000549883 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
HDAC7-229ENST00000549883 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
HDAC7-229ENST00000549883 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
HDAC7-229ENST00000549883 PCP4P48539 62 aa3.17□□□□□ -1.9
HDAC7-229ENST00000549883 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
HDAC7-229ENST00000549883 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
HDAC7-229ENST00000549883 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
HDAC7-229ENST00000549883 RPS28P62857 69 aaKnown RBP3.15□□□□□ -1.91
HDAC7-229ENST00000549883 KRTAP15-1Q3LI76 137 aa3.15□□□□□ -1.91
HDAC7-229ENST00000549883 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
HDAC7-229ENST00000549883 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
HDAC7-229ENST00000549883 ROMO1P60602 79 aa3.1□□□□□ -1.91
HDAC7-229ENST00000549883 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
HDAC7-229ENST00000549883 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
HDAC7-229ENST00000549883 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
HDAC7-229ENST00000549883 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
HDAC7-229ENST00000549883 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
HDAC7-229ENST00000549883 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
HDAC7-229ENST00000549883 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
HDAC7-229ENST00000549883 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
HDAC7-229ENST00000549883 H3BS24 57 aa2.99□□□□□ -1.93
HDAC7-229ENST00000549883 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
HDAC7-229ENST00000549883 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
HDAC7-229ENST00000549883 MT1AP04731 61 aa2.96□□□□□ -1.94
HDAC7-229ENST00000549883 SVIPQ8NHG7 77 aa2.94□□□□□ -1.94
HDAC7-229ENST00000549883 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
HDAC7-229ENST00000549883 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
HDAC7-229ENST00000549883 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
HDAC7-229ENST00000549883 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
HDAC7-229ENST00000549883 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
HDAC7-229ENST00000549883 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
HDAC7-229ENST00000549883 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
HDAC7-229ENST00000549883 MT3P25713 68 aa2.67□□□□□ -1.98
HDAC7-229ENST00000549883 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
HDAC7-229ENST00000549883 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
HDAC7-229ENST00000549883 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
HDAC7-229ENST00000549883 PRAC1Q96KF2 57 aa2.6□□□□□ -1.99
HDAC7-229ENST00000549883 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
HDAC7-229ENST00000549883 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
HDAC7-229ENST00000549883 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
HDAC7-229ENST00000549883 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
HDAC7-229ENST00000549883 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
HDAC7-229ENST00000549883 KTN1-AS1Q86SY8 53 aa2.29□□□□□ -2.04
HDAC7-229ENST00000549883 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
HDAC7-229ENST00000549883 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
HDAC7-229ENST00000549883 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
HDAC7-229ENST00000549883 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
HDAC7-229ENST00000549883 LUZP6Q538Z0 58 aa2.06□□□□□ -2.08
HDAC7-229ENST00000549883 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
HDAC7-229ENST00000549883 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
HDAC7-229ENST00000549883 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
HDAC7-229ENST00000549883 A0A0A0MQY5 61 aa1.94□□□□□ -2.1
HDAC7-229ENST00000549883 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
HDAC7-229ENST00000549883 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
HDAC7-229ENST00000549883 NDUFAF8A1L188 74 aa1.71□□□□□ -2.14
HDAC7-229ENST00000549883 PRM1P04553 51 aa1.62□□□□□ -2.15
HDAC7-229ENST00000549883 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
HDAC7-229ENST00000549883 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
HDAC7-229ENST00000549883 INE1O15225 51 aa1.36□□□□□ -2.19
HDAC7-229ENST00000549883 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 185.7 ms