RNA–Protein interactions for RNA: ENST00000548858.1

AC025260.1-201, humanhuman

BASIC

Gene AC025260.1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025260.1-201ENST00000548858 HSPG2P98160 4391 aa1.35□□□□□ -2.19
AC025260.1-201ENST00000548858 LRP1BQ9NZR2 4599 aa1.35□□□□□ -2.19
AC025260.1-201ENST00000548858 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
AC025260.1-201ENST00000548858 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
AC025260.1-201ENST00000548858 PKD1P98161 4303 aa1.33□□□□□ -2.2
AC025260.1-201ENST00000548858 PKHD1P08F94 4074 aa1.33□□□□□ -2.2
AC025260.1-201ENST00000548858 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
AC025260.1-201ENST00000548858 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
AC025260.1-201ENST00000548858 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
AC025260.1-201ENST00000548858 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
AC025260.1-201ENST00000548858 VPS13BQ7Z7G8 4022 aa1.3□□□□□ -2.2
AC025260.1-201ENST00000548858 FAT1Q14517 4588 aa1.3□□□□□ -2.2
AC025260.1-201ENST00000548858 FAT3Q8TDW7 4589 aa1.29□□□□□ -2.2
AC025260.1-201ENST00000548858 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
AC025260.1-201ENST00000548858 RNF213Q63HN8 5207 aa1.28□□□□□ -2.21
AC025260.1-201ENST00000548858 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
AC025260.1-201ENST00000548858 TNXBP22105 4242 aa1.25□□□□□ -2.21
AC025260.1-201ENST00000548858 M0R2T5 61 aa1.22□□□□□ -2.21
AC025260.1-201ENST00000548858 LRP2P98164 4655 aa1.22□□□□□ -2.21
AC025260.1-201ENST00000548858 SMR3BP02814 79 aaPredicted RBP1.21□□□□□ -2.22
AC025260.1-201ENST00000548858 FAT4Q6V0I7 4981 aa1.21□□□□□ -2.22
AC025260.1-201ENST00000548858 MUC2Q02817 5179 aa1.2□□□□□ -2.22
AC025260.1-201ENST00000548858 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
AC025260.1-201ENST00000548858 CRCT1Q9UGL9 99 aa1.18□□□□□ -2.22
AC025260.1-201ENST00000548858 LPAP08519 4548 aa1.16□□□□□ -2.22
AC025260.1-201ENST00000548858 KRTAP19-2Q3LHN2 52 aa1.15□□□□□ -2.23
AC025260.1-201ENST00000548858 MUC17Q685J3 4493 aa1.15□□□□□ -2.23
AC025260.1-201ENST00000548858 KRTAP19-5Q3LI72 72 aa1.14□□□□□ -2.23
AC025260.1-201ENST00000548858 MT1HL1P0DM35 61 aa1.11□□□□□ -2.23
AC025260.1-201ENST00000548858 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
AC025260.1-201ENST00000548858 MT1AP04731 61 aa1.06□□□□□ -2.24
AC025260.1-201ENST00000548858 MT1XP80297 61 aa1.06□□□□□ -2.24
AC025260.1-201ENST00000548858 FSIP2Q5CZC0 6907 aa1.05□□□□□ -2.24
AC025260.1-201ENST00000548858 USH2AO75445 5202 aa1.03□□□□□ -2.24
AC025260.1-201ENST00000548858 PRM1P04553 51 aa1.03□□□□□ -2.24
AC025260.1-201ENST00000548858 MT1EP04732 61 aa1.03□□□□□ -2.24
AC025260.1-201ENST00000548858 KRTAP4-1Q9BYQ7 146 aa1.03□□□□□ -2.24
AC025260.1-201ENST00000548858 SSPOA2VEC9 5147 aa1.02□□□□□ -2.25
AC025260.1-201ENST00000548858 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
AC025260.1-201ENST00000548858 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
AC025260.1-201ENST00000548858 MT1LQ93083 61 aa1□□□□□ -2.25
AC025260.1-201ENST00000548858 MT1BP07438 61 aa0.99□□□□□ -2.25
AC025260.1-201ENST00000548858 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
AC025260.1-201ENST00000548858 MT1HP80294 61 aa0.95□□□□□ -2.26
AC025260.1-201ENST00000548858 KRTAP19-7Q3SYF9 63 aa0.95□□□□□ -2.26
AC025260.1-201ENST00000548858 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
AC025260.1-201ENST00000548858 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
AC025260.1-201ENST00000548858 HMCN1Q96RW7 5635 aa0.93□□□□□ -2.26
AC025260.1-201ENST00000548858 NEBP20929 6669 aa0.92□□□□□ -2.26
AC025260.1-201ENST00000548858 MT2AP02795 61 aa0.92□□□□□ -2.26
AC025260.1-201ENST00000548858 KRTAP20-1Q3LI63 56 aa0.92□□□□□ -2.26
AC025260.1-201ENST00000548858 SPRR2FQ96RM1 72 aa0.92□□□□□ -2.26
AC025260.1-201ENST00000548858 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
AC025260.1-201ENST00000548858 MT1FP04733 61 aa0.91□□□□□ -2.26
AC025260.1-201ENST00000548858 SPRR2AP35326 72 aa0.91□□□□□ -2.26
AC025260.1-201ENST00000548858 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
AC025260.1-201ENST00000548858 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
AC025260.1-201ENST00000548858 SPRR2BP35325 72 aa0.9□□□□□ -2.27
AC025260.1-201ENST00000548858 KMT2DO14686 5537 aa0.9□□□□□ -2.27
AC025260.1-201ENST00000548858 KRTAP19-6Q3LI70 58 aa0.88□□□□□ -2.27
AC025260.1-201ENST00000548858 GPR98Q8WXG9 6306 aa0.88□□□□□ -2.27
AC025260.1-201ENST00000548858 SPRR2DP22532 72 aa0.87□□□□□ -2.27
AC025260.1-201ENST00000548858 SPRR2EP22531 72 aa0.85□□□□□ -2.27
AC025260.1-201ENST00000548858 MT1GP13640 62 aa0.84□□□□□ -2.27
AC025260.1-201ENST00000548858 MT1MQ8N339 61 aa0.82□□□□□ -2.28
AC025260.1-201ENST00000548858 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
AC025260.1-201ENST00000548858 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
AC025260.1-201ENST00000548858 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
AC025260.1-201ENST00000548858 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
AC025260.1-201ENST00000548858 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
AC025260.1-201ENST00000548858 DSTQ03001 7570 aaKnown RBP0.7□□□□□ -2.3
AC025260.1-201ENST00000548858 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
AC025260.1-201ENST00000548858 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
AC025260.1-201ENST00000548858 MT4P47944 62 aa0.67□□□□□ -2.3
AC025260.1-201ENST00000548858 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
AC025260.1-201ENST00000548858 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
AC025260.1-201ENST00000548858 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 89.1 ms